Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0159 ATGGCAACTTATTTGCCAAATTCATATTCTGAGACACCAATTACCTCTAGTAATATAACATTATATATGAACACTGGTTCATATCCAGAAGCATTCTCTGGCAATTCTCAGGAGCAAAATGGCTGCTTTGTGATCCCGCCAATGAGTTTATCACAATCAGCCCCAGAACAACAAGAAATCTTAGCGAATCTCGGTGGGTTACAAACCGGGGACTATGATTTCTCTGCATGGAGACAAGGGAGAAATGAGATGCTAGTAACAAATCCGATGGAAGGACATAACTTGCAGAGCCAGGGATTATCTCTCAGCCTTGGAACCCAAACACCAACAGGAATCCAAGTGTCTCCTTTCCATGATCAAAGTTCGAATCCAAGTTTTGATTCATTTTTAGGTCAAAATCCATCAATTTCAGGCCATAAAAGCAGCTCAGCTAGGCATGAGTGTATGAGGCACAGTGAAATTTTGCCTCCTGATTTGCGTGAAGCTAGCCAAGTTTTGAATAGAGGGGATTATTCTTTGCATGATGGGATGCCAAGTGTTTCAAGAACAATTCCTAATTCCAAGTACCTCAAGGCAGCTCAAGAGCTACTTGATGAAGTTGTTGACATCCAAAAAGCTATAAAACAAAGTCCTAGCACACGTGAGAAAAAGACTTATAATGAGAATGATGGAAGACTGGAAAATGAAAGGGCACCTGCTAATGGAGAGCCTAACCCTCAAGATTTAGCCGGCAACGCCTCTTGTGAGATTTCGAATGCTGAAAAACAGGATCTGCAGAACAAGTTAACAAAGCTACTGTCTATGTTGGATGAGGTTCACAGTAGGTACAAACAATATTATCATCAGATGCAGATTGTGGTATCGTCATTTGATGTGATAGCAGGACGTGGGGCAGCCAAACCGTACACGGCGCTGGCTCTCCAAACCATTTCACGTCATTTCCGGTGCTTGCATGATGCAATCACCGGGCAGATCAGCGCGACACAGAAGAGCCTTGGAGAGCAAGATTCTGCAGGAAATAATAAAGGAGTTGGAATATCAAGACTCAGGTACGTTGACCAACAAATCCGGCAACAAAGGGCTCTCCAGCAGCTTGGAGTTATGCATCATGCATGGAGGCCACAAAGGGGACTACCAGAAAACTCTGTTTCAATTCTTCGCGCTTGGCTTTTTGAACATTTCCTTCATCCCTATCCCAAAGATTCTGAGAAGGCAATGCTTGCAAGGCAGACTGGTTTGACTAGAAGCCAGGTCTCAAATTGGTTTATAAATGCACGAGTTCGTCTTTGGAAACCTATGATTGAGGAGATGTACAAGGAAGAAATTGAAACTGTGGACTTGCACTCAAGTTCTTCAACTGAAGAAGCATCCAAGGTAAGCAAAAGCGACGTCAAGATCTCCGACGACGGATGTGATGACTTGCAACAGAGCCAGAGTTCAATAGTCGACAAGAACAGCCACGTTGGACAAGCTAAGGACTTGAGATCTGATAAGCAAACTGAGGAGCAACAAAGGCTCAGCTTTGACGACTGTAGTGTCTTCCAAGATGACACAGTTGTTCAGACCAATGAAGGCGGCGCAGGGTTTGTGGCGGTTGCTCCGGCGTGCCAAATGTCCGAGTTGGGGCGGTTTCAGCCTGGAAACGGCGTGTCACTGACATTAGGATTGCAGCATTGTGAAGTTGGTAATTATATGTCCAGCGAGAGCCGTCATAGCTTCGTTGTTATGCGGGAAGATGGTACCATTGGAGCTCAGACCTCAGAACTTAATTATGTAGCTGCTGGAAACCAGCACCAAAGGTTCACTTCGCCACATTAA 1818 0.4466 MATYLPNSYSETPITSSNITLYMNTGSYPEAFSGNSQEQNGCFVIPPMSLSQSAPEQQEILANLGGLQTGDYDFSAWRQGRNEMLVTNPMEGHNLQSQGLSLSLGTQTPTGIQVSPFHDQSSNPSFDSFLGQNPSISGHKSSSARHECMRHSEILPPDLREASQVLNRGDYSLHDGMPSVSRTIPNSKYLKAAQELLDEVVDIQKAIKQSPSTREKKTYNENDGRLENERAPANGEPNPQDLAGNASCEISNAEKQDLQNKLTKLLSMLDEVHSRYKQYYHQMQIVVSSFDVIAGRGAAKPYTALALQTISRHFRCLHDAITGQISATQKSLGEQDSAGNNKGVGISRLRYVDQQIRQQRALQQLGVMHHAWRPQRGLPENSVSILRAWLFEHFLHPYPKDSEKAMLARQTGLTRSQVSNWFINARVRLWKPMIEEMYKEEIETVDLHSSSSTEEASKVSKSDVKISDDGCDDLQQSQSSIVDKNSHVGQAKDLRSDKQTEEQQRLSFDDCSVFQDDTVVQTNEGGAGFVAVAPACQMSELGRFQPGNGVSLTLGLQHCEVGNYMSSESRHSFVVMREDGTIGAQTSELNYVAAGNQHQRFTSPH 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0159 605 SUPERFAMILY Homeodomain-like 373 439 IPR009057 -
Alju04g0159 605 MobiDBLite consensus disorder prediction 208 245 - -
Alju04g0159 605 ProSiteProfiles 'Homeobox' domain profile. 369 432 IPR001356 GO:0003677
Alju04g0159 605 MobiDBLite consensus disorder prediction 444 503 - -
Alju04g0159 605 Coils Coil 255 275 - -
Alju04g0159 605 MobiDBLite consensus disorder prediction 209 230 - -
Alju04g0159 605 SMART prehox3 178 323 IPR006563 -
Alju04g0159 605 FunFam BEL1-like homeodomain protein 9 375 437 - -
Alju04g0159 605 SMART HOX_1 372 436 IPR001356 GO:0003677
Alju04g0159 605 Gene3D - 368 445 - -
Alju04g0159 605 CDD homeodomain 372 433 IPR001356 GO:0003677
Alju04g0159 605 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 116 456 - -
Alju04g0159 605 MobiDBLite consensus disorder prediction 471 486 - -
Alju04g0159 605 MobiDBLite consensus disorder prediction 488 503 - -
Alju04g0159 605 Pfam Associated with HOX 184 322 IPR006563 -
Alju04g0159 605 Pfam Homeobox KN domain 389 428 IPR008422 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0159 Alju-ChrAlju04 1351327 1354609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0159 53 603 Homeobox Transcription Factor Family AT4G34610 45.583 2.41e-129 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Alju04g0159 POX 2.8e-48 No_clan