Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0149 ATGGAAGCTGGACAGGTAGAGAGGAGTAAGTGCCAAGACTGTGGGAACCAAGCGAAGAAAGGTTGTGAGTACAAGAGATGTAGAAGTTGCTGCAAGAGCAAAGGGCTTGAGTGTGAAACTCATGTTCACAGCACTTGGGTTCCTGTATATAATAGAAGACGCCATAGGGACCATCATCATCCTCATAATTTCCTTAAAAGGCACAAACACAACAACCCCTATCCCCCACCAGATGAAAAGGAGGAGGAGTTGAAGTTTCCAGAATGGGTGAGTATGAAGGCGATGTTTAATTGCGTACAAGTGCGATCAAAGGATGATTGGGTGAATGAATTTGCGTACCATACTTCAGTGAGGATTGGAGGGCATGTGTTTTGTGGTCTTCTTCATGATCAAGGCCCTTCACATGGTGGTTTTGGTGAGACTTCTTCAGTTCCTCTTGTTCTTCAGCATAATAACAATCTTACCAACGTAGCCACACAGACGAACCATATTGACGCTGCAACGACATTAATGGCTCCTCCATTATCATCATCTTCTTCTGCTCCTGACTCTATCTTTCAATATCCACCATACCCTTTTACCCTACCTCCTATGCCTTATTTCTCCAACCCCCAATCTTAG 621 0.4428 MEAGQVERSKCQDCGNQAKKGCEYKRCRSCCKSKGLECETHVHSTWVPVYNRRRHRDHHHPHNFLKRHKHNNPYPPPDEKEEELKFPEWVSMKAMFNCVQVRSKDDWVNEFAYHTSVRIGGHVFCGLLHDQGPSHGGFGETSSVPLVLQHNNNLTNVATQTNHIDAATTLMAPPLSSSSSAPDSIFQYPPYPFTLPPMPYFSNPQS 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0149 206 Pfam Domain of unknown function (DUF702) 9 134 - -
Alju04g0149 206 NCBIfam putative zinc finger domain, LRP1 type 10 52 IPR006510 -
Alju04g0149 206 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 6 175 IPR007818 GO:0003700|GO:0006355
Alju04g0149 206 MobiDBLite consensus disorder prediction 60 80 - -
Alju04g0149 206 NCBIfam LRP1 C-terminal domain 85 133 IPR006511 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0149 Alju-ChrAlju04 1268205 1269433 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0149 10 132 C2H2 Transcription Factor Family AT2G21400 46.565 6.77e-35 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Alju04g0149 DUF702 2.7e-39 No_clan