Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0137 ATGGAGGTTGTGGTAGCGAACGCGTTAAAATCGAGTTTGCATAGAGAATTGGCGGGTCTGAAATCGACACAGCAAGCCTTCAGCGAGGAAATTTGGTGCTTCAATTCGAATAACGGTGTTGCCGGTGAGGATTTCTCGGTGGACGACCTATTCGATTTCTCTCAGAGTGAATTTCAACCTGAATATGAGGAAGACGACGAGGAAAAAGACAGTCTCTCCGGTTCCTCCTCACATGACCGGAGCGAAGAAGACACCAACTCCAATTCCTCTTCCGGTCTCGGCGATTCTGGCTTCGTTTTTTCTGGCGAACTCGCCGTTCCGGACGATGATTTGGCTGACTTAGAATGGGTTTCTCATTTCGTTGACGACTCGGTCCCGGAGCTCTCTCTTCTGTACCCTGTCCGTTCCGAGGGAACGAGGACCCGGTCTGAACCGGAACCTAGCCCTGGCTTTGCGAAAACTCCTTGTTTTCCCTTTGAATTTCCTGTCAAGGCGAGAAGCACTAAGCGTAGAAGAGCCAGAACGTTCGGCCCTTTGCTTTCCCGGCCATCTTCGCCGCCGTCTTCGTGTTCATCGGTATTTTCCTCGTCGTTGACTCTTATCACCGTCGGCGCGGCTCCGAACACCGCCTTTGCACATGCCGTTACGGAACCGCCCTTGGAAAAGCAGAAGAAAAGGGCTGAGGCTCAATCCGGTAGTGGTGGTGGGTCCCAGATTCAGCGTCGGTGCACCCATTGCCAGGTGCAGAAGACTCCACAATGGAGAACAGGTCCGCTAGGCCCGAAAACCCTCTGTAACGCTTGTGGAGTCCGGTTCAAGTCCGGTCGGCTTTTTCCGGAGTATAGACCGGCCTGTAGCCCAACTTTCTCAAGCGATGTTCACTCGAACAGCCATCGTAAAGTGTTAGAGATGAGGAAGAGGAAGGAGATGAGCGAACCGGAATGTGGGTTGACTCAACCTCAAACTGTCCCGAGTTGCTGA 981 0.528 MEVVVANALKSSLHRELAGLKSTQQAFSEEIWCFNSNNGVAGEDFSVDDLFDFSQSEFQPEYEEDDEEKDSLSGSSSHDRSEEDTNSNSSSGLGDSGFVFSGELAVPDDDLADLEWVSHFVDDSVPELSLLYPVRSEGTRTRSEPEPSPGFAKTPCFPFEFPVKARSTKRRRARTFGPLLSRPSSPPSSCSSVFSSSLTLITVGAAPNTAFAHAVTEPPLEKQKKRAEAQSGSGGGSQIQRRCTHCQVQKTPQWRTGPLGPKTLCNACGVRFKSGRLFPEYRPACSPTFSSDVHSNSHRKVLEMRKRKEMSEPECGLTQPQTVPSC 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0137 326 MobiDBLite consensus disorder prediction 56 94 - -
Alju04g0137 326 MobiDBLite consensus disorder prediction 216 241 - -
Alju04g0137 326 Pfam GATA zinc finger 243 276 IPR000679 GO:0006355|GO:0043565
Alju04g0137 326 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 239 300 - -
Alju04g0137 326 PANTHER GATA TRANSCRIPTION FACTOR 35 310 - -
Alju04g0137 326 CDD ZnF_GATA 242 290 IPR000679 GO:0006355|GO:0043565
Alju04g0137 326 PIRSF Txn_fac_GATA_plant 11 325 IPR016679 GO:0003677|GO:0005634|GO:0045893
Alju04g0137 326 Gene3D - 236 311 IPR013088 GO:0006355|GO:0008270
Alju04g0137 326 ProSitePatterns GATA-type zinc finger domain. 243 268 IPR000679 GO:0006355|GO:0043565
Alju04g0137 326 ProSiteProfiles GATA-type zinc finger domain profile. 237 273 IPR000679 GO:0006355|GO:0043565
Alju04g0137 326 SMART GATA_3 237 291 IPR000679 GO:0006355|GO:0043565
Alju04g0137 326 MobiDBLite consensus disorder prediction 305 326 - -
Alju04g0137 326 MobiDBLite consensus disorder prediction 71 85 - -
Alju04g0137 326 FunFam GATA transcription factor 235 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0137 Alju-ChrAlju04 1157682 1158765 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0137 8 325 C2C2-Gata Transcription Factor Family AT5G66320 44.179 4.87e-62 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Alju04g0137 GATA 6e-16 CL0167