Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0129 ATGTTGTGTTGGAGACAAAGCGAGTGGTCGATAGTCGTATACAGAGCGGCGAATAGGCGTGCTGCGACCACCAGCAAGGTACTCCTACTTTCTACAATTTCTTCGCGGAGTCGAATCCTTTTCTTGTTCTTCTCGCGATTCGCGCCCTTTCTTCTCTTCCCCTATCCACAATTCTTGATAAAATTTGTCAAATTCTGGATATCCTGTACGTTTTATCTGCAAAAATATACTAAAAGTGAAGAAGAACCGATAAAAATTGAAACATTGAAGGAGAAATGTCGATGGAAAGCAGTTGAAAGTTGGAGAAACCCAAAGTTGATAGCAGTGGAAGCGATAATGCGAACACTTTGTGATGTTTGTGAGAGCGCTGCAGCGATCATCTTCTGTGCTGCCGACGAGGCTGCTTTATGCCGTGCATGCGACGAAAAGGTCCATACATGCAACAAGCTTGCTAGTAAACATGTGCGAGTTGGGCTGGCTGACCCCACTGATGTTCCCCGCTGTGACATATGCGAAAATGCACCTGCTTTCTTTTATTGTGAGATAGATGGTAGTTCGTTGTGTCTTCAATGTGACATGATAGTACATGTTGGTGGTAAAAGAACCCATGAAAGATATCTTCTATTGAGGCAAAGAGTTGAGTTTCCAGGTGACAAACCTGGTCGATGGGAAGAACTAGGGCTGCAACCCCTTGATCAAAATGAATTAAAGAAGGACCAAAGTCAGCCCCTTAAGCTAATAACAAGAGATGGCCATCAGAGTCATAGGGTCTCACCTGCTTCAATTCTAGAAAATAATGTTGATGATCATGGAAAGATGGATAAAAAACTAATTGATCTTAATACTAGACCACAACGGTTAAATGGACCAACATCAAACAACCAGGAACCAGCCATGGATATTTCAAGTGGCAATAATGATGAATCTGTGGTACCAATAGAATCCTTCAAATGTGAGGCTGTGAAGAAATGA 972 0.4239 MLCWRQSEWSIVVYRAANRRAATTSKVLLLSTISSRSRILFLFFSRFAPFLLFPYPQFLIKFVKFWISCTFYLQKYTKSEEEPIKIETLKEKCRWKAVESWRNPKLIAVEAIMRTLCDVCESAAAIIFCAADEAALCRACDEKVHTCNKLASKHVRVGLADPTDVPRCDICENAPAFFYCEIDGSSLCLQCDMIVHVGGKRTHERYLLLRQRVEFPGDKPGRWEELGLQPLDQNELKKDQSQPLKLITRDGHQSHRVSPASILENNVDDHGKMDKKLIDLNTRPQRLNGPTSNNQEPAMDISSGNNDESVVPIESFKCEAVKK 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0129 323 SMART bboxneu5 112 159 IPR000315 GO:0008270
Alju04g0129 323 SMART bboxneu5 163 208 IPR000315 GO:0008270
Alju04g0129 323 MobiDBLite consensus disorder prediction 284 310 - -
Alju04g0129 323 ProSiteProfiles Zinc finger B-box type profile. 112 159 IPR000315 GO:0008270
Alju04g0129 323 FunFam B-box zinc finger protein 19 114 204 - -
Alju04g0129 323 ProSiteProfiles Zinc finger B-box type profile. 163 208 IPR000315 GO:0008270
Alju04g0129 323 MobiDBLite consensus disorder prediction 283 310 - -
Alju04g0129 323 CDD Bbox1_BBX-like 116 159 - -
Alju04g0129 323 PANTHER B-BOX ZINC FINGER PROTEIN 22 113 252 - -
Alju04g0129 323 CDD Bbox1_BBX-like 168 208 - -
Alju04g0129 323 Gene3D Classic Zinc Finger 113 207 - -
Alju04g0129 323 Pfam B-box zinc finger 115 156 IPR000315 GO:0008270
Alju04g0129 323 Pfam B-box zinc finger 165 204 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0129 Alju-ChrAlju04 1089309 1091585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0129 113 322 C2C2-CO-like Transcription Factor Family AT4G38960 58.962 4.71e-81 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Alju04g0129 zf-B_box 6.5e-06 No_clan