Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0117 ATGGGCGATACTGAAGAAGCCCACACTGATATGATGCATAATCTTCAATCCTCGTTCGGAACTTCATCATCTTCGTTTCTGAAACAACCTTTAAGCATGGACCAACTCAGTGTACCTCAATTCAACCCCTCACAAATGCGCGCGCGGCATTTTCAGCAGAGCTTTGGCGGGGATGGTAATAATAATAAGAGACTGGGCATACCACCGTCACATCCCCACCAGATCCCTCCGATTTCCCCATATTCTCAGATCCCTGTGTCGCGACCCACGTCACAGCAAAATGTTAGCCCAGGACCTACTCATTCGCGATCATTATCACAGCCGTCATTTTTCTCGCTCGATTCTCTGCCTCCCTTAAGCCCCTCTCCTTTTCGAGACTCCACTTCAACTTCCATGTCAGACCCAGCTTCGGCTGATGTATCTATGGAGGATCGCGATGTAAGTTCGCATTCTTTATTGCCACCTTCACCTTTTACAAGGGGTAATCCTTCACGGGTTGGTGAAAGTCTACCCCCGCGTAAAGCACATAGGCGCTCTAACAGTGATATACCATTTGGTTTTTCTACTGTAATGCAATCTTCGCCTCCTCTTATTCCTCTAAGAGGTTCTGGTGGACTAGATAGGTCATTGTCTGGGAGAGAAAATTCAGGTGCAGGTCTAGCGAAACCTGCACAATTAGTTAAAAAGGAAATGAGTTGGGACAGAATTGTTGACCACAATATAGAGGGATCAGGTGAGAAGAAATCTCCTGAAGGGGAGGTTATGGATGATCTTTTCTCTGCGTACATGAACTTAGATAACATTGATGCACTTAACTCTTCGGGGACTGATGACAAGAACGGCAATGAAAATCGTGATGATTTGGATAGTAGAGCGAGTGGAACAAAGATAAATGGAGGTGATAGCAGTGATAATGAAGCAGAAAGCAGTGTCAACGAAACTGGGGCCAATATGCAAAGACAGGGAACCAAATCTTCAAATGAAATGAAGGAAGGGGTGAAAAGGAGTGCGGGAGGAGATATTGCACCCACCACAAGACACTACAGAAGTGTCTCAATGGATAGTTTCATCGGGAAGTTAAACTTTGCCGAGGACTGTCCTAAACTGCCGCCTTCTCCAGGTCCTCGTCCTGGGCAGCTTTCTCCCACCAATTCAATTGATGGTAATTCATCTGCCTTTAGCTTGGAGTTTGGAAATGGAGAATTCAGCGGGCCTGAATTGAAGAAAATTATGGCCAATGAAAAACTTGCTGAGATTGCTTTAACAGACCCTAAGCGGGCAAAAAGGATTTTGGCAAATAGACAATCAGCTGCACGTTCTAAAGAACGGAAGATGCGATACATTTCTGAACTAGAACACAAGGTTCAGACTCTGCAGACTGAAGCTACCACGCTGTCTGCACAACTTACCTTGTTACAGAGAGATTCCGTGGGGCTCACAAACCAGAATAATGAGTTGAAGTTTCGCCTTCAAGCCATGGAACAACAGGCAAAACTCCGAGATGCACTAAATGAAGCTCTAACTGCTGAGGTTCAACGACTTAAACTCGCTACGGCTGAGTTGAATGGCGAATCTCATGCTTCTGGCTGCATGATCCCGCAGCATTCTATGAACCCTCAGATGTTTCAGTCGCAGAGGCAGCAATCACAGGCATGCCAATCAAACATTCAGATGCAGCATCAGCAGAACAGTAGTGCTCCGTCTAAGACCGACTCAAAACAGTAG 1725 0.4586 MGDTEEAHTDMMHNLQSSFGTSSSSFLKQPLSMDQLSVPQFNPSQMRARHFQQSFGGDGNNNKRLGIPPSHPHQIPPISPYSQIPVSRPTSQQNVSPGPTHSRSLSQPSFFSLDSLPPLSPSPFRDSTSTSMSDPASADVSMEDRDVSSHSLLPPSPFTRGNPSRVGESLPPRKAHRRSNSDIPFGFSTVMQSSPPLIPLRGSGGLDRSLSGRENSGAGLAKPAQLVKKEMSWDRIVDHNIEGSGEKKSPEGEVMDDLFSAYMNLDNIDALNSSGTDDKNGNENRDDLDSRASGTKINGGDSSDNEAESSVNETGANMQRQGTKSSNEMKEGVKRSAGGDIAPTTRHYRSVSMDSFIGKLNFAEDCPKLPPSPGPRPGQLSPTNSIDGNSSAFSLEFGNGEFSGPELKKIMANEKLAEIALTDPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSVGLTNQNNELKFRLQAMEQQAKLRDALNEALTAEVQRLKLATAELNGESHASGCMIPQHSMNPQMFQSQRQQSQACQSNIQMQHQQNSSAPSKTDSKQ 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0117 574 SMART brlzneu 421 485 IPR004827 GO:0003700|GO:0006355
Alju04g0117 574 Gene3D - 424 476 - -
Alju04g0117 574 MobiDBLite consensus disorder prediction 182 196 - -
Alju04g0117 574 MobiDBLite consensus disorder prediction 11 60 - -
Alju04g0117 574 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 423 486 IPR004827 GO:0003700|GO:0006355
Alju04g0117 574 FunFam probable transcription factor PosF21 424 477 - -
Alju04g0117 574 Pfam bZIP transcription factor 425 479 IPR004827 GO:0003700|GO:0006355
Alju04g0117 574 MobiDBLite consensus disorder prediction 270 346 - -
Alju04g0117 574 MobiDBLite consensus disorder prediction 364 392 - -
Alju04g0117 574 MobiDBLite consensus disorder prediction 1 223 - -
Alju04g0117 574 MobiDBLite consensus disorder prediction 529 574 - -
Alju04g0117 574 SUPERFAMILY Leucine zipper domain 425 476 IPR046347 GO:0003700|GO:0006355
Alju04g0117 574 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 104 569 - -
Alju04g0117 574 CDD bZIP_plant_RF2 426 475 IPR044759 GO:0003700|GO:0006355
Alju04g0117 574 MobiDBLite consensus disorder prediction 84 137 - -
Alju04g0117 574 Coils Coil 441 496 - -
Alju04g0117 574 Coils Coil 504 524 - -
Alju04g0117 574 MobiDBLite consensus disorder prediction 295 326 - -
Alju04g0117 574 MobiDBLite consensus disorder prediction 527 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0117 Alju-ChrAlju04 1006067 1009098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0117 1 543 bZIP Transcription Factor Family AT4G38900 61.566 0.0 570
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Alju04g0117 bZIP_1 7.4e-09 CL0018