Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0045 ATGGAGGAAGGAACCTTGGAGATAGGGATGGAATATAGAACTGTATCCGGAGTTGCTGGGCCGTTGGTCATTCTTGATAAAGTTAAGGGACCGAAGTATCAAGAGATAGTTAACATTCGTTTAGGAGATGGAACTACTCGCCGTGGGCAAGTTTTAGAAGTTGATGGTGAAAAGGCTGTTGTTCAGGTCTTTGAAGGTACATCTGGGATTGACAATAAATTTACAACTGTACAATTTACTGGAGAGGTGTTGAAAACTCCTGTCTCACTGGACATGCTCGGGCGCATATTTAATGGTTCTGGAAAACCAATTGATAATGGTCCACCAATTTTGCCTGAGGCATACTTGGATATATCAGGAAGCTCCATCAACCCTAGTGAGAGAACCTATCCAGAGGAGATGATACAGACAGGAATATCCACAATCGATGTCATGAATTCTATTGCTAGAGGTCAAAAGATTCCTCTTTTCTCAGCTGCTGGTCTTCCCCACAATGAGATTGCTGCTCAGATATGTCGTCAGGCTGGGTTAGTCAAGCGATTGGAAAAATCTGATAATCTTCTTGAGGGTGGGGAAGAGGACAATTTCGCCATTGTGTTTGCGGCTATGGGAGTTAATATGGAGACTGCACAGTTTTTCAAGCGAGATTTCGAGGAGAACGGCTCAATGGAGAGAGTGACCCTTTTTCTTAATTTGGCAAATGATCCTACTATTGAGCGTATCATCACTCCTCGTATTGCTCTTACTACTGCTGAATACCTGGCGTATGAATGTGGGAAGCATGTTCTTGTGATACTCACAGATATGAGTTCTTATGCTGATGCTCTTCGTGAGGTATCTGCTGCTCGAGAGGAAGTACCGGGAAGGCGAGGATATCCTGGTTATATGTATACAGATCTTGCAACAATTTATGAACGTGCTGGAAGAATTGAGGGGCGAAAAGGCTCCATTACACAAATACCTATTCTAACAATGCCTAATGATGATATTACTCATCCAACTCCTGATCTTACGGGGTACATTACTGAGGGGCAGATATACATTGACAGGCAGCTGTATAACAGACAGATATACCCACCAATTAATGTCCTTCCATCGCTGTCTCGACTGATGAAGAGTGCCATTGGTGAGGGGATGACTCGAAGGGATCATTCTGATGTGTCAAACCAGCTCTATGCTAATTATGCCATTGGAAAGGATGTCCAGGCAATGAAAGCTGTGGTCGGAGAAGAAGCACTTTCATCCGAGGATCTGCTGTATCTGGAATTTTTGGACAAGTTTGAAAGGAAGTTTGTCACCCAAGGAGCTTATGACACCCGCAATATCTTCCAGTCGCTAGATCTTGCGTGGACTTTGCTTCGGATTTTCCCTCGTGAACTTCTCCATCGTATACCAGCCAAGACACTTGATCAATATTATAGTCGGGATGCTGGGAATTGA 1440 0.4375 MEEGTLEIGMEYRTVSGVAGPLVILDKVKGPKYQEIVNIRLGDGTTRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKSDNLLEGGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLYNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVTQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDQYYSRDAGN 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0045 479 FunFam V-type proton ATPase subunit B, brain 20 479 - -
Alju04g0045 479 CDD ATP-synt_V_A-type_beta_C 378 472 - -
Alju04g0045 479 ProSitePatterns ATP synthase alpha and beta subunits signature. 359 368 IPR020003 GO:0005524
Alju04g0045 479 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 85 374 IPR027417 -
Alju04g0045 479 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 138 368 IPR000194 GO:0005524
Alju04g0045 479 NCBIfam V-type ATPase subunit B 11 477 IPR005723 GO:0033180|GO:0046961|GO:1902600
Alju04g0045 479 CDD V_A-ATPase_B 83 376 - -
Alju04g0045 479 PIRSF V-ATPsynth_beta/V-ATPase_B 3 479 IPR022879 -
Alju04g0045 479 CDD ATP-synt_V_A-type_beta_N 11 82 - -
Alju04g0045 479 Gene3D - 20 478 - -
Alju04g0045 479 PANTHER V-TYPE PROTON ATPASE SUBUNIT B 1 476 IPR022879 -
Alju04g0045 479 Hamap V-type ATP synthase beta chain [atpB]. 9 477 IPR022879 -
Alju04g0045 479 Pfam ATP synthase alpha/beta family, beta-barrel domain 15 81 IPR004100 GO:0046034|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0045 Alju-ChrAlju04 534680 538585 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0045 3 479 Primary Pumps ATPases(2) AT4G38510 97.904 0.0 958