Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0033 ATGGCGATGGAGGATAACGAGAGCCGAGCGAGCGGAGTGCAGGAAACATCGTCGTCTCCCTCTCAAAACCGGCAACAGAGACAGAAACTTGAAGTGTACAATGAGGTCCTTCGTCGCCTCAAGGAGTCCAACAACGAAGTGGCTATGCAGCCTGGCTTCCAACATCAGCTCTGGGCTCATTTCAACCGCCTTCCGACACGGTATGCATTGGATGTGAATGTGGAAAGGGCTGCGGATGTTCTGATGCACAAGAAACTACTGCATATGGCACAGGATCCCGCTAATAGGCCTGCGATTGAAGTTCGCCTGGTCCAGGTTCAACCCATATCTGACGGAAACTTAGCTGATTCTGTCCATTCAGAAGCTCCTGGTAATGAAACTGGTCAAATCTCTTCAAAGCACTCAGGGAGACAGAGTATACATCCACCTCCTGCTTTTGGTTCGTCTCCAAACCTTGAAGCCCTGGCACTTGAAGCAACTAAGAGTGAAGATCTAGAGGTGGAACGCTCTGTTTATGCAGGCGAACAATATTCACGGCCTATGCATGAAATTGCCTTCTCAACAGAAGACAAGCCAAAGCTTCTCAGTCAGTTAACTTCTTTGCTTTCTGAGATTGGACTGAACATTCAAGAGGCGCATGTTTTTTCCACAACGGATGGTTACTCATTAGATGTGTTTGTTGTTGATGGATGGCCCTATGAGGAAACAGAACAGCTTAAAGCAGTTTTGGAGAAAGAAGTCTTGTTGATTGAGAGGCAGGCATGGCTGATTCAACAATCAGTATCTTCTGTTGGTGAGCCTGATCAAGGTGTGAAATGTGATCCCGCTCATTTGACAATACCTAATGATGGGACGGATGTTTGGGAAATAGATCCTAAACATTTGAAATTTGGAAGTAAAATTGCGTCTGGATCATATGGTGATCTGTTTAAAGGTACATATTGTGGCCAGGAAGTGGCGATTAAGGTTCTCAAAGCTGAGCATGTAAATTCAGACTTACAGAGGGAGTTTGCCCAGGAAGTCTACATCATGAGAAAGGTTCGGCATAAGAATGTTGTACAATTTATAGGAGCATGTACCAAGCCCCCATATTTGTGCATAGTAACAGAATTTATGTCCGGCGGAAGTGTGTATGACTACTTACATAAGCAAAAGGGTGTTTTTAAATTTCCATCCCTGCTCAAAGTAGCAATTGATGTTTCTAAGGGAATGAATTACTTGCACCAAAATAACATTATCCACAGAGACTTGAAGGCTGCAAATCTTTTGATGGATGAAAATTGTGTGGTCAAGGTTGCTGATTTTGGGGTTGCTAGAGTGAAAGCTCAATCTGGAGTTATGACAGCAGAAACTGGAACATATCGATGGATGGCTCCCGAGGTCATTGAACACAAGCCATATGATCACAAGGCTGATATATTTAGTTTTGGAGTTGTTTTATGGGAATTGCTAACTGGAAAGCTTCCGTATGAGAATTTGACCCCACTACAGGCAGCTATAGGAGTGGTTCAAAAGGGTCTACGACCCACCATCCCCAAGAATATCCATCCAAAATTTGTTGAGCTTCTTGAGAGATGTTGGCAGCAAGATCCAACAGTAAGACCTGATTTCTCTGAAATTACAGACATTCTGCAACGATTGGCTAAAGAGGTTGGAGATGGAGAGGATGCACGCAAGGAAAAATCTGGAGGAATTTTCTCTGTCCTCAGGCGAGATTATTCGCCTCCACAGAATTTTCAAAACCAAATACGAATTTCTTCTACTTCTGCAAGGGCATTTGTATTGTCGCTGCCCTTTCATAGGGCTAGAAGCTTGCCACCTATACCAGAAGCTGCACTTGCTAACAAGAACGTGCTTTCAAGAGTCACATCCTAG 1875 0.4405 MAMEDNESRASGVQETSSSPSQNRQQRQKLEVYNEVLRRLKESNNEVAMQPGFQHQLWAHFNRLPTRYALDVNVERAADVLMHKKLLHMAQDPANRPAIEVRLVQVQPISDGNLADSVHSEAPGNETGQISSKHSGRQSIHPPPAFGSSPNLEALALEATKSEDLEVERSVYAGEQYSRPMHEIAFSTEDKPKLLSQLTSLLSEIGLNIQEAHVFSTTDGYSLDVFVVDGWPYEETEQLKAVLEKEVLLIERQAWLIQQSVSSVGEPDQGVKCDPAHLTIPNDGTDVWEIDPKHLKFGSKIASGSYGDLFKGTYCGQEVAIKVLKAEHVNSDLQREFAQEVYIMRKVRHKNVVQFIGACTKPPYLCIVTEFMSGGSVYDYLHKQKGVFKFPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENCVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADIFSFGVVLWELLTGKLPYENLTPLQAAIGVVQKGLRPTIPKNIHPKFVELLERCWQQDPTVRPDFSEITDILQRLAKEVGDGEDARKEKSGGIFSVLRRDYSPPQNFQNQIRISSTSARAFVLSLPFHRARSLPPIPEAALANKNVLSRVTS 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0033 624 MobiDBLite consensus disorder prediction 114 145 - -
Alju04g0033 624 Coils Coil 23 43 - -
Alju04g0033 624 Gene3D Phosphorylase Kinase; domain 1 285 373 - -
Alju04g0033 624 ProSiteProfiles Protein kinase domain profile. 295 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g0033 624 PRINTS Tyrosine kinase catalytic domain signature 471 493 IPR001245 GO:0004672|GO:0006468
Alju04g0033 624 PRINTS Tyrosine kinase catalytic domain signature 515 537 IPR001245 GO:0004672|GO:0006468
Alju04g0033 624 PRINTS Tyrosine kinase catalytic domain signature 452 462 IPR001245 GO:0004672|GO:0006468
Alju04g0033 624 PRINTS Tyrosine kinase catalytic domain signature 369 382 IPR001245 GO:0004672|GO:0006468
Alju04g0033 624 PRINTS Tyrosine kinase catalytic domain signature 406 424 IPR001245 GO:0004672|GO:0006468
Alju04g0033 624 Gene3D Transferase(Phosphotransferase) domain 1 374 581 - -
Alju04g0033 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 412 424 IPR008271 GO:0004672|GO:0006468
Alju04g0033 624 Coils Coil 233 253 - -
Alju04g0033 624 SUPERFAMILY ACT-like 181 245 IPR045865 -
Alju04g0033 624 ProSiteProfiles ACT domain profile. 183 266 IPR002912 -
Alju04g0033 624 Pfam Protein tyrosine and serine/threonine kinase 295 543 IPR001245 GO:0004672|GO:0006468
Alju04g0033 624 MobiDBLite consensus disorder prediction 1 29 - -
Alju04g0033 624 MobiDBLite consensus disorder prediction 114 149 - -
Alju04g0033 624 FunFam Serine/threonine-protein kinase isoform 1 285 373 - -
Alju04g0033 624 SUPERFAMILY Protein kinase-like (PK-like) 281 543 IPR011009 -
Alju04g0033 624 MobiDBLite consensus disorder prediction 9 29 - -
Alju04g0033 624 FunFam serine/threonine-protein kinase HT1 374 564 - -
Alju04g0033 624 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 129 551 - -
Alju04g0033 624 SMART serkin_6 295 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g0033 624 CDD STKc_MAP3K-like 301 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0033 Alju-ChrAlju04 410215 418685 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0033 8 573 MAP Kinase Kinase Kinase AT4G35780 64.664 0.0 729
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Alju04g0033 PK_Tyr_Ser-Thr 1.4e-73 CL0016