Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0028 ATGGCTTTCTTCCTTTACTTTTTCTTCCTTCTTGTTTCATTTGCTTCTGCTTGTGATCGCTGCGTCCACCAAACTAAGGCTGCCTATTTCTCTGAAGGCGCTGCTCTTTCCTCTGGGGCATGTGGGTATGGCTCCTTGGCGTTGGAATTAAGTGGTGGACGCCTTGCAGCTGGTGTTCCTTCCTTGTACAAAAATGGAGCCGGTTGTGGTGCCTGCTTTCAGATAAGATGCAAGAGCTCAAGTCTGTGTAAAAAATCAGGTGTCAGAGTTGTTTTGACCGATCTCAATACCCATAATGAAACTGATTTGGTGCTAAGCAGAAGTGCTTTCGAGGCCATGGCTCAGAAGGGTAGCGCTCAACAACTTTTGAAGCTTGGAATCTTGAATGTTGAATATAAGAGAGTTCCGTGTGAGTATAAAAATAAGAACATGGCGGTGCGGGTGGAAGAATCAAGCCAAAAACCCTATTACTTGGCAGTTAAATTTCTGTACCAAGGAGGTCAAACAGAGATAGTAGCCGTTGACGTTGCTCAGGTAATTGAATCATCAAACTGGAGCTTCATGAGCAGAAACCATGGGGCAGTGTGGGACACAAGTAGGGTTCCAGGAGGTGCACTGCAAATGAGGATGGTGGTAACATCAGGGTACGATGGAAAATGGATGTGGGCAAAGAAGGTGTTACCTGCTGATTGGAAAACAGGACAAGTGTATGACACTGGTGTTCAGATCACTGACATTGCTCAAGAGGCCTGTTCTCCCTGTGATCATGGACCCTGGTCTTGA 783 0.461 MAFFLYFFFLLVSFASACDRCVHQTKAAYFSEGAALSSGACGYGSLALELSGGRLAAGVPSLYKNGAGCGACFQIRCKSSSLCKKSGVRVVLTDLNTHNETDLVLSRSAFEAMAQKGSAQQLLKLGILNVEYKRVPCEYKNKNMAVRVEESSQKPYYLAVKFLYQGGQTEIVAVDVAQVIESSNWSFMSRNHGAVWDTSRVPGGALQMRMVVTSGYDGKWMWAKKVLPADWKTGQVYDTGVQITDIAQEACSPCDHGPWS 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0028 260 SUPERFAMILY Barwin-like endoglucanases 7 141 IPR036908 -
Alju04g0028 260 CDD DPBB_EXLA_N 13 139 - -
Alju04g0028 260 Pfam Expansin C-terminal domain 145 228 IPR007117 -
Alju04g0028 260 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 156 239 IPR007117 -
Alju04g0028 260 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 38 142 IPR007112 -
Alju04g0028 260 Pfam Lytic transglycolase 56 132 IPR009009 -
Alju04g0028 260 SUPERFAMILY PHL pollen allergen 142 238 IPR036749 -
Alju04g0028 260 SMART dpbb_1 56 132 IPR007112 -
Alju04g0028 260 Gene3D - 13 138 IPR036908 -
Alju04g0028 260 Gene3D - 139 244 IPR036749 -
Alju04g0028 260 PRINTS Expansin/Lol pI family signature 125 141 IPR007118 GO:0005576
Alju04g0028 260 PRINTS Expansin/Lol pI family signature 185 199 IPR007118 GO:0005576
Alju04g0028 260 PRINTS Expansin/Lol pI family signature 37 55 IPR007118 GO:0005576
Alju04g0028 260 PRINTS Expansin/Lol pI family signature 59 77 IPR007118 GO:0005576
Alju04g0028 260 PRINTS Expansin/Lol pI family signature 225 239 IPR007118 GO:0005576
Alju04g0028 260 PANTHER EXPANSIN-B3 11 242 - -
Alju04g0028 260 PRINTS Major pollen allergen Lol pI signature 163 178 IPR005795 GO:0005576|GO:0019953
Alju04g0028 260 PRINTS Major pollen allergen Lol pI signature 57 68 IPR005795 GO:0005576|GO:0019953
Alju04g0028 260 PRINTS Major pollen allergen Lol pI signature 215 232 IPR005795 GO:0005576|GO:0019953
Alju04g0028 260 PRINTS Major pollen allergen Lol pI signature 114 129 IPR005795 GO:0005576|GO:0019953
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0028 Alju-ChrAlju04 362095 363233 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0028 36 260 Expansin Gene Family AT3G45970 59.471 6.47e-106 305