Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0025 ATGACATCAGGGGAAGGAGAAATGGAACTGCCAGGATTCCGATTCCACCCCACCGAAGAAGAACTCCTCGATTTCTACCTCAAGAACAGCATCCTCGGCAACAAGCTCCGCTTCGACATCATCGGTTTCCTCAACATTTATCACCACGATCCCTGGGACTTGCCTGGCCTTGCGAAGGTGGGAGAGAGAGAGTGGTACTTCTTCGTGCCGAGGGACAAGAAGCAGGGGAGCGGCGGGAGGCCCAACCGCACCACCCAGAAAGGGTTCTGGAAGGCCACCGGTTCAGACCGAAGAATCATAAGCCTCTCGGAGCCCAGGCGGCTGATCGGGCTGAGGAAGACCCTGGTGTTCTACCGAGGGAGAGCCCCCCGCGGGTGCAAGACCGACTGGGTCATGAACGAGTACCGCCTCCCCGACTCGTGCCACCTCCCCAAGGACACTGTGCTCTGCAAGATTTACAGAAAGGCCACCTCCTTGAAGGTCCTCGAGCAGAGGGCCGCCCTTGAACAAGAGTCCAAGCAACTCCCTACAGCTAACGTCTCCCCCTGCAGCTCCAGCGACACCCCCTCCCTCCTTCTCAAGCAAGAATCCCCTGACCATGATCACAAGGCCACTTCCCTCCCACCCAAAGACCTTCCCATTATTTCCATGGACTGGACCCAAGACCCCTTCTGGACTCAATTTAACAACACTCCTTGGCCCTCCCTCTTAAACTTCTAA 720 0.5694 MTSGEGEMELPGFRFHPTEEELLDFYLKNSILGNKLRFDIIGFLNIYHHDPWDLPGLAKVGEREWYFFVPRDKKQGSGGRPNRTTQKGFWKATGSDRRIISLSEPRRLIGLRKTLVFYRGRAPRGCKTDWVMNEYRLPDSCHLPKDTVLCKIYRKATSLKVLEQRAALEQESKQLPTANVSPCSSSDTPSLLLKQESPDHDHKATSLPPKDLPIISMDWTQDPFWTQFNNTPWPSLLNF 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0025 239 FunFam NAC domain-containing protein 67-like 18 159 - -
Alju04g0025 239 ProSiteProfiles NAC domain profile. 9 155 IPR003441 GO:0003677|GO:0006355
Alju04g0025 239 MobiDBLite consensus disorder prediction 173 207 - -
Alju04g0025 239 Pfam No apical meristem (NAM) protein 11 137 IPR003441 GO:0003677|GO:0006355
Alju04g0025 239 MobiDBLite consensus disorder prediction 173 193 - -
Alju04g0025 239 SUPERFAMILY NAC domain 10 155 IPR036093 GO:0003677|GO:0006355
Alju04g0025 239 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 194 - -
Alju04g0025 239 Gene3D NAC domain 18 159 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0025 Alju-ChrAlju04 338693 339494 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0025 7 197 NAC Transcription Factor Family AT2G17040 72.251 3.43e-103 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju04g0025 NAM 5e-34 No_clan