Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0018 ATGGGTTGCTGCCCATCGTCATTTCTGACCGAAACTCACCCAGAAAAGCAGCAAAATCAACAACCCCCTCACCATGTTCACACTCACAACCACATCCATACCCAACCACACCCGCCACCCTCTCTCACTGCCGACCCATCCGCCGCCGGTGGGGTTCCTTCTTTCTCCGAGTTCTCTTTCTCCGACCTCAAAGCAGCCACCAATAATTTTAGCTCCGACTTTATTGTGTCCGAGAGTGGAGAGAAAGCACCCAACCTTGTGTATAAAGGTCGCCTCCCCAACCGCAGTTGGATTGCCGTCAAGAAGTTCACCAAGGCTGCATGGCCTGATCCTAAACAATTTGTGGATGAGGCGTCAGGTGTAGGAAAATTGCGACATCGCAGGCTTGCTAATCTGATTGGCTACTGCTGTGATGGAGATGAGAGGCTGCTTGTTGCCGAATACATGCCCAATGATACTCTCGCTAAGCATCTTTTCCACTGGGAAAACCAGACTATTGAGTGGGCCATGCGCTTAAGAGTGGCTTTTTCCATTGCAGAAACTTTAAATTACTGTAGTTCCGAGGGTCGCCCATTATACCATGATTTGAATGCTTACAGGGTTCTTTTTGATGAGGAAGGTGATCCACGTCTGTCGTGTTTTGGTCTGATGAAGAACAGTAGGGATGGAAAAAGTTATAGCACGAATCTTGCTTACACACCTCCTGAGTACTTAAGAAATGGAAGGGTCACTCCTGAAAGTGTCATTTACAGCTTTGGTACTGTTCTCCTAGACCTACTAAGTGGAAAACACATCCCTCCAAGTCATGCACTTGACATGATACAGGGGAAAGCCAACATGCTTCTTATGGATTCACATTTAGAGGGAAAGTTCTCTAAAGAAGAGGCAGCAGTAGTTGTCAATCTGGCCTCTAAATGTTTGCAATATGAACCCAGGGAGCGGCCTGATACAAAGGAATTAGTGACAACACTTGCTCCATTGCAAACAAAACCTGATGTACCTTCTTACGTTATGCTTGGAATTCCAAAGCATGAGGAAGCTCCATCAACCCCACAACGCCCTCTCTCAGCCATGGGTGAGGCTTGTTCAAGGATGGACCTCACTGCAATACATCAGATCTTGGTTGCAACGCACTACAGAGATGATGAAGGAACTGAGTTGTCTTTCCAAGAGTGGACCCAACGGATGAGGGATATGTTGGAAGCAAGGAAGCGCGGAGACTATGCATTCCGTGACAAAGATTTTAAGACAGCAATTGAAAATTATTCACAGTTTATCGATGTGGGAACAATGGTGTCGCCAACGGTTTTTGCTCGGCGCAGTCTATGCTATCTGTTATGCGATCAACCAGATCCTGCGCTGAGAGATGCAATGCAAGCACAATGTGTTTATCCAGACTGGCCTACAGCATTCTACATGCAATCAGTTGCTCTAGCGAAGCTGGACATGCAAAAGGACGCTGCTGATATGTTGAATGAGGCTACTGCTTTGGAAGAAAAGAGGCAAAGAGGAGGCAGAGGCGCATAG 1527 0.4702 MGCCPSSFLTETHPEKQQNQQPPHHVHTHNHIHTQPHPPPSLTADPSAAGGVPSFSEFSFSDLKAATNNFSSDFIVSESGEKAPNLVYKGRLPNRSWIAVKKFTKAAWPDPKQFVDEASGVGKLRHRRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVAFSIAETLNYCSSEGRPLYHDLNAYRVLFDEEGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIYSFGTVLLDLLSGKHIPPSHALDMIQGKANMLLMDSHLEGKFSKEEAAVVVNLASKCLQYEPRERPDTKELVTTLAPLQTKPDVPSYVMLGIPKHEEAPSTPQRPLSAMGEACSRMDLTAIHQILVATHYRDDEGTELSFQEWTQRMRDMLEARKRGDYAFRDKDFKTAIENYSQFIDVGTMVSPTVFARRSLCYLLCDQPDPALRDAMQAQCVYPDWPTAFYMQSVALAKLDMQKDAADMLNEATALEEKRQRGGRGA 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0018 508 Gene3D Tetratricopeptide repeat domain 397 505 IPR011990 GO:0005515
Alju04g0018 508 MobiDBLite consensus disorder prediction 1 49 - -
Alju04g0018 508 FunFam probable serine/threonine-protein kinase At5g41260 150 341 - -
Alju04g0018 508 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 24 503 IPR045845 GO:0004672|GO:0009742
Alju04g0018 508 FunFam probable serine/threonine-protein kinase At4g35230 45 148 - -
Alju04g0018 508 Gene3D Transferase(Phosphotransferase) domain 1 150 340 - -
Alju04g0018 508 Coils Coil 480 500 - -
Alju04g0018 508 Pfam Protein tyrosine and serine/threonine kinase 88 324 IPR001245 GO:0004672|GO:0006468
Alju04g0018 508 MobiDBLite consensus disorder prediction 10 25 - -
Alju04g0018 508 SUPERFAMILY TPR-like 400 501 IPR011990 GO:0005515
Alju04g0018 508 SUPERFAMILY Protein kinase-like (PK-like) 54 334 IPR011009 -
Alju04g0018 508 ProSiteProfiles Protein kinase domain profile. 73 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g0018 508 Gene3D Phosphorylase Kinase; domain 1 48 148 - -
Alju04g0018 508 FunFam probable serine/threonine-protein kinase At4g35230 397 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0018 Alju-ChrAlju04 274126 280798 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0018 58 336 Glycoside Hydrolase AT3G07070 35.948 1.52e-45 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Alju04g0018 PK_Tyr_Ser-Thr 6e-26 CL0016