Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0001 ATGGGGATTTGCTGGGGTTCTCCAGCTGACAACCCAAGCACCACCAGCACATCCGATCACCTTAGTGCAGCTACAACGGGAACATCCCGAACTACCAGCAATACTACTACTGCTACTACATCTTACGGGAGTGGAAGCATCAGCCAGTTTTCCGAGTCCAGTGGTGGTGACGCTTATCCAAATGGGCAGATTTTGCCTACTGCAAATTTAAGGATGTTCACTTTTGCGGAATTGAAGGCTGCGACTAAAAATTTTAGAGTTGATACGGTACTTGGAGAGGGAGGTTTTGGAAAGGTCTTCAAGGGTTGGCTCGAAGAAAAGGCAACGCAAAAAAATGGAAGTGGAACAGTCGTCGCCGTTAAAAAATTGAACTCAGAGAGTTTACAAGGATTTGAGGAATGGCAGTCAGAGATAAATTTTCTGGGACGGCTTTCTCATCCTAACCTCGTTAAGCTGTTAGGGTACTGTTGGGAAGAAAATGAGCTTCTTCTCGTCTATGAATTCATGCAAAAGGGCAGTTTGGAAAATCACCTATTTGGAAGGGGTTCTGCTGTTCAACCACTTCCTTGGGACATTAGGCTTAAGATTGCCATTGGAGCAGCTCGTGGTTTGGCATTCCTGCACACATCTGAGAAAGTAATTTACCGTGATTTCAAGGCCTCCAATATATTGCTCGATGGGTCTTATAATGCAAAGATTTCAGACTTTGGCTTGGCAAAATTGGCACCTTCAGCTAGTCGGTCCCATGTAACAACAAGGGTGATGGGCACGTTTGGCTATGCGGCTCCTGAGTATGTGGCAACAGGGCATCTGTACGTGAAGAGTGATGTGTATGGATTTGGAGTTGTTTTGGTTGAGATGCTGACAGCCCTTCGGGCACTAGATCAAAACCGCCCCAGCGGGCAACATAATCTTGTGGACTGGGTAAAACCATACTTACAAGATGGAAGAAAATTGAAGAGCATAATGGATTCACGGTTGGAGGGGAAATATCCATCCAAATCTGCATTTCGTATAGCTCTACTTGCTTTAAAATGTCTTGCATTAGAGCCTAAACACCGGCCATCAATGAAGGAAGTTTTGGAGAACTTGGAGAGGATTCAGGCTGCGAATGATAGGCATGTGGAGCCTAGACTCCGTTCTAATCGTAACGTGGCACCCCATCATGTTTCCCGACCTCTGCGCCCTCGATCTCATTGA 1200 0.4592 MGICWGSPADNPSTTSTSDHLSAATTGTSRTTSNTTTATTSYGSGSISQFSESSGGDAYPNGQILPTANLRMFTFAELKAATKNFRVDTVLGEGGFGKVFKGWLEEKATQKNGSGTVVAVKKLNSESLQGFEEWQSEINFLGRLSHPNLVKLLGYCWEENELLLVYEFMQKGSLENHLFGRGSAVQPLPWDIRLKIAIGAARGLAFLHTSEKVIYRDFKASNILLDGSYNAKISDFGLAKLAPSASRSHVTTRVMGTFGYAAPEYVATGHLYVKSDVYGFGVVLVEMLTALRALDQNRPSGQHNLVDWVKPYLQDGRKLKSIMDSRLEGKYPSKSAFRIALLALKCLALEPKHRPSMKEVLENLERIQAANDRHVEPRLRSNRNVAPHHVSRPLRPRSH 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0001 399 ProSitePatterns Protein kinases ATP-binding region signature. 91 122 IPR017441 GO:0005524
Alju04g0001 399 MobiDBLite consensus disorder prediction 372 399 - -
Alju04g0001 399 ProSiteProfiles Protein kinase domain profile. 85 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g0001 399 SUPERFAMILY Protein kinase-like (PK-like) 62 364 IPR011009 -
Alju04g0001 399 FunFam Serine/threonine-protein kinase BIK1 52 168 - -
Alju04g0001 399 Pfam Protein tyrosine and serine/threonine kinase 87 364 IPR001245 GO:0004672|GO:0006468
Alju04g0001 399 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 169 377 - -
Alju04g0001 399 Gene3D Phosphorylase Kinase; domain 1 69 168 - -
Alju04g0001 399 MobiDBLite consensus disorder prediction 8 55 - -
Alju04g0001 399 CDD STKc_IRAK 91 367 - -
Alju04g0001 399 PANTHER OS01G0588500 PROTEIN-RELATED 33 368 - -
Alju04g0001 399 Gene3D Transferase(Phosphotransferase) domain 1 169 386 - -
Alju04g0001 399 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
Alju04g0001 399 MobiDBLite consensus disorder prediction 1 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0001 Alju-ChrAlju04 6191 11056 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0001 57 388 Receptor kinase-like Gene Family AT4G02010 49.555 6.72e-103 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Alju04g0001 PK_Tyr_Ser-Thr 7.7e-48 CL0016