Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g3381 ATGGCTTCTCATCTCTCTTGCTCCGCCGCTGACCTTGCCCCACTGCTCACGGCCGCCACCAACGCAACCGCTGCTGCCACCTACCTCTGTACTCAACTCCAAGCCATATCCGCAAAGCTGAGCGACACCACCTACGCCGTCAACAACACCTACCTTCTCTTCTCAGCCTATCTGGTGTTCGCCATGCTGTGCGCCGGTTCCGTGCGGGCCAAGAACACTATGAACATCATGCTCACCAACGTCCTGGATGCTGCGGCCGGCGGCCTCTCTTACTATCTCTTTGGGTTTGCCTTTGCATTTGGGTCCCCCTCCAACGGCTTCATCGGCCGCCACTTGTTCGGCCTCCGACACTTCCCTTCCCCATCCGGAGACTACAGCTTCTTCCTCTATCAATGGGCTTTTTCCATAGCAGCCGCCGGAATTACCAGCGGCTCCATTGCCGAGAGAACCCAGTTTGTGGCTTACCTCATTTACTCCTCTTTCCTCACCGGCTTCGTTTACCCCGTCGTTTCCCATTGGTTCTGGTCCCCTGACGGGTGGGCCAGCCCCACTAGGGCCCATATCCTTTTATTTGGGTCCGGTGCCATTGACTTCGCCGGTTCGGGCGTGGTACACATGGTGGGCGGCATAGCAGGCTTGTGGGGTGCATATTTGGAAGGGCCAAGAATTGGGCGATTCGACCGGACGGGCCACTCTGTGGCCTTGCGGGGCCACAGCGCCTCCCTAGTTGTGTTGGGATCGTTCTTGTTATGGTTCGGGTGGTACGGCTTCAACCCGGACTCCTTCCTCACCATCTTGAAGCCTTACGGAGGCGGTGGCAATTATTACGGTCAATGGAGCGCCGCAGGCAGGACAGCTGTGACCACCACACTGGCTGGCTGCACCGCTGCGCTGACCACCTTGTTCGGAAAACGCTTATTGGTGGGACACTGGAACGTCATAGACGTGTGTAACGGGCTGCTCGGGGGATTCGCCGCCATAACGTCCGGCTGCTCCGTGGTAGAGCCGTGGGTGGCGATCATATGCGGCTTAGTGGCGGCATGGGTGCTGATTGGGCTGAACAAGCTGGCGGTGAGGGTGGGGTACGACGACCCGCTGGAGGCGGCGCAGCTGCACGGAGGGTGCGGAGCGTGGGGGTTGCTGTTCACGGGATTGTTGGCGAAGAAGGAATACGTGGAGGAGGTATACGGAGGGGGGAGGAGGCACGGGCTGCTGATGGGAGGGGGAGGGAGGCTGGTGGCGGCGCAGGTGGTAGGGATAGTGGTGGTGTGCGGGTGGGTGACGGCGACGATGGGGCCGCTGTTCTACGTGCTGAATAACATGAAGCTGTTGAGGATATCGAGGGAGGACGAGATGGCGGGAATGGATCTGACGAGGCATGGCGGCTTTGCTTATGCTTACCACGACGAGGATGAAAGCGTGAGGCCTTCAAGCTTCAAGACGGCGATGGGAAAGATCGAGCCTGCGAATTCCCTCGCCACCACTCCCACCCCATAG 1497 0.5959 MASHLSCSAADLAPLLTAATNATAAATYLCTQLQAISAKLSDTTYAVNNTYLLFSAYLVFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLSYYLFGFAFAFGSPSNGFIGRHLFGLRHFPSPSGDYSFFLYQWAFSIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSPDGWASPTRAHILLFGSGAIDFAGSGVVHMVGGIAGLWGAYLEGPRIGRFDRTGHSVALRGHSASLVVLGSFLLWFGWYGFNPDSFLTILKPYGGGGNYYGQWSAAGRTAVTTTLAGCTAALTTLFGKRLLVGHWNVIDVCNGLLGGFAAITSGCSVVEPWVAIICGLVAAWVLIGLNKLAVRVGYDDPLEAAQLHGGCGAWGLLFTGLLAKKEYVEEVYGGGRRHGLLMGGGGRLVAAQVVGIVVVCGWVTATMGPLFYVLNNMKLLRISREDEMAGMDLTRHGGFAYAYHDEDESVRPSSFKTAMGKIEPANSLATTPTP 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g3381 498 NCBIfam ammonium transporter 42 465 IPR001905 GO:0008519|GO:0016020|GO:0072488
Alju03g3381 498 SUPERFAMILY Ammonium transporter 45 446 - -
Alju03g3381 498 Gene3D Ammonium transporter AmtB like domains 24 482 IPR029020 -
Alju03g3381 498 FunFam Ammonium transporter 29 479 - -
Alju03g3381 498 ProSitePatterns Ammonium transporters signature. 197 222 IPR018047 GO:0008519|GO:0016020|GO:0072488
Alju03g3381 498 PANTHER AMMONIUM TRANSPORTER 20 461 - -
Alju03g3381 498 Pfam Ammonium Transporter Family 50 465 IPR024041 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g3381 Alju-ChrAlju03 57600075 57601571 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g3381 27 498 Inorganic Solute Cotransporters AT1G64780 77.386 0.0 742