Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Alju03g3378 | ATGGAGAAAGCACCAGCCTTTCTTTTGTTGGCTTCTTACATCTTCGTCTCCGTTTCCGCTATCGATAGTGATTATGCACAGTGCAATTGTGACGAAGAAGGGCTTTTGAGCATACATAACATTCTAGAGAGCCAAAGAGTCAGCGACTTCTTTATTGCCATAGCATATTTTTCGATCCCCCTTGAACTCCTCTACTTCGTTAGTCGCTCCAACCTTCCCTTCAAATGGGTGTTCCTTCAATTCATTGCATTCATAGTCCTTTGTGGCTTGACGCATTTGCTTAATGCATATACTTATTACGGACCTCATTCCTTCCAGTTGGTGCTCTCCCTCACAATTGCTAAACTCCTTACAGCTCTGGTCTCTTGTGCAACTGCAATTACCCTTTTTACTCTGATTCCACTTCTTCTCAAAATCAAAGTAAGGGAGCTTTTTTTGAAGCAGAACGTGTTGGAATTAGACCAGGAGATTGGAATGATCAAAAGACAAAAGGAAGCAAGCTGGCATGTTCGGATGCTAACTCGGGAAATTAGGAAGTCTCTGGATAAGCATACAATCTTGTATACCACCCTTGTTGAGCTTTCTAAATCATTGGACTTGCATAACTGCGCTGTTTGGATGCCAAATGAGGATGGGCGAGAAATGTACTTAACCCATGAGTTGAAAACAAGCTCCCCTGAGATGTTTCACCATTCCATTCCCATAAATGACCCAGATGTCATAGAGATCAGAAAAAGTAAAGGGGTAAGGATTTTGAGGCCCGAATCAGCACTAGGAGCTGCAAGTAAGGGGGGATCTGGGGAGTCAGGTGCTGTTGCAGCTATTCGTATGCCGATGCTTCATGTTTCAAACTTTAAAGGAGGGACACCTGAGTTAGTTGATACATCCTATGCTATTCTTGTTTTGGTTCTTCCGAGTTCAAACTCCAGGGCTTGGAGCCACCAAGAGATGGAGATAGTGGAGGTAGTTGCTGATCAGGTCGCTGTAGCCCTGTCTCATGCATCTGTTCTTGAAGAGTCTCAGCTCATGAGGCAGAAACTGGCAGAGCAAAACCGAGCTTTGCAACAGGCTCAAAATAATGCAATGATGGCTAGTCAGGCAAGGAAGTCATTTCAGAAAGTGATGAGTCATGGTATGCGCAGGCCTATGCATTCAATTCTCGGCTTGCTTTCCATGTTTCAAGAGGACAATTTGAGATCTGAGCAAAAGGTTATAGTTGACACAATGATCAAAGTTGGCCATGTTCTCTCAAGTTTGATCAATGATGTAATGGAGATTTCGGTAAATGATAAAGGAAGCTTCCGGCTGGAGATGAGACCTTTTGATTTACATTTGATGATGAGAGAAGCTGCTTGTATTGCCAAGTGTTTGTGTGTATATAAAGGCTTTAATTTTAAAATTGAAGTCCAGAAGTCGTTGCCCGATCTGGTGATAGGGGACCAGGCTAGGGCTTTTCAAGTAATTTTGCATATGATTGACTATTTAGTGAACATATATGATGGAGAAAGGTCTTTCATTTTTCAAGTTTATCTTGAAAATGATAATGGGTATAAGGATGATAATTTTTTGGGAATATGGAGATCAGGCATGCAAAATGATTATGATGTCTATATAAAATTTGATTTTCGGATAACTGGTACAAGTTCACGGTCAAATGGATCAACTTCAACAAGACGCTATGCTGGTGGAAGGCACCACAGCAATGAATCTAATGAGGGCTTAAGCTTCAGCATGTGCAAAACGCTGGCACAGATGATGCAAGGCAATATCTGGTTATCACGGAATGCTCTAGGATTGGCACAAAGCATGACACTTGCTCTCAAGTTCCAGATAGGACCATCTCACGGAAGATCCATTTTAGCACCTAAAGATTCTCTGGACTCTCGGTTCAGAAGCCTCAAGGTTGTGTTAACCGATGACGATGATGTAAACAGGACAGTGACAAAGAAACTTCTTGAGAAGTTGGGTTGCCAAGTAACTGCAGTTTCATCAGGGTTTGAATGCCTGGGTGCTATAAGTGCATCTGGGAACACATTCAAAGTCATCCTTTTGGATCTGCACATGCCTGAAATGGATGGTTTTGACGTGGCTATGAGGATACGGAAGTTCCACAGCCGCAACTGGCCCTTGATCATTGCTCTCACGGCAAGTGCCGAAGAAGATGTGATGGATAGATGCCTACGCGTTGGAATGAATGGATTAATTCGAAAACCTATTCTCCTCCCAGAGATAGCAGATGAGCTACGAAGAGTCCTGCAACACGCCGGCGAAAAATTGTGA | 2280 | 0.4289 | MEKAPAFLLLASYIFVSVSAIDSDYAQCNCDEEGLLSIHNILESQRVSDFFIAIAYFSIPLELLYFVSRSNLPFKWVFLQFIAFIVLCGLTHLLNAYTYYGPHSFQLVLSLTIAKLLTALVSCATAITLFTLIPLLLKIKVRELFLKQNVLELDQEIGMIKRQKEASWHVRMLTREIRKSLDKHTILYTTLVELSKSLDLHNCAVWMPNEDGREMYLTHELKTSSPEMFHHSIPINDPDVIEIRKSKGVRILRPESALGAASKGGSGESGAVAAIRMPMLHVSNFKGGTPELVDTSYAILVLVLPSSNSRAWSHQEMEIVEVVADQVAVALSHASVLEESQLMRQKLAEQNRALQQAQNNAMMASQARKSFQKVMSHGMRRPMHSILGLLSMFQEDNLRSEQKVIVDTMIKVGHVLSSLINDVMEISVNDKGSFRLEMRPFDLHLMMREAACIAKCLCVYKGFNFKIEVQKSLPDLVIGDQARAFQVILHMIDYLVNIYDGERSFIFQVYLENDNGYKDDNFLGIWRSGMQNDYDVYIKFDFRITGTSSRSNGSTSTRRYAGGRHHSNESNEGLSFSMCKTLAQMMQGNIWLSRNALGLAQSMTLALKFQIGPSHGRSILAPKDSLDSRFRSLKVVLTDDDDVNRTVTKKLLEKLGCQVTAVSSGFECLGAISASGNTFKVILLDLHMPEMDGFDVAMRIRKFHSRNWPLIIALTASAEEDVMDRCLRVGMNGLIRKPILLPEIADELRRVLQHAGEKL | 759 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Alju03g3378 | 759 | CDD | REC_ETR-like | 633 | 748 | - | - | |
| Alju03g3378 | 759 | MobiDBLite | consensus disorder prediction | 548 | 570 | - | - | |
| Alju03g3378 | 759 | FunFam | Ethylene receptor | 631 | 755 | - | - | |
| Alju03g3378 | 759 | Gene3D | - | 431 | 612 | IPR036890 | - | |
| Alju03g3378 | 759 | Gene3D | - | 332 | 430 | - | - | |
| Alju03g3378 | 759 | FunFam | Ethylene receptor 4 | 334 | 428 | - | - | |
| Alju03g3378 | 759 | Pfam | Response regulator receiver domain | 635 | 747 | IPR001789 | GO:0000160 | |
| Alju03g3378 | 759 | SUPERFAMILY | GAF domain-like | 185 | 334 | - | - | |
| Alju03g3378 | 759 | SUPERFAMILY | Homodimeric domain of signal transducing histidine kinase | 352 | 432 | IPR036097 | GO:0000155|GO:0007165 | |
| Alju03g3378 | 759 | PANTHER | TWO-COMPONENT SENSOR HISTIDINE KINASE | 24 | 756 | - | - | |
| Alju03g3378 | 759 | CDD | HisKA | 365 | 427 | IPR003661 | GO:0000155|GO:0007165 | |
| Alju03g3378 | 759 | SMART | HisKA_10 | 367 | 432 | IPR003661 | GO:0000155|GO:0007165 | |
| Alju03g3378 | 759 | SUPERFAMILY | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 421 | 595 | IPR036890 | - | |
| Alju03g3378 | 759 | Gene3D | - | 633 | 758 | - | - | |
| Alju03g3378 | 759 | Gene3D | - | 166 | 331 | IPR029016 | - | |
| Alju03g3378 | 759 | PIRSF | Ethylen_sen_hybr_HK | 1 | 759 | IPR014525 | GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740 | |
| Alju03g3378 | 759 | Pfam | His Kinase A (phospho-acceptor) domain | 369 | 428 | IPR003661 | GO:0000155|GO:0007165 | |
| Alju03g3378 | 759 | SMART | gaf_1 | 182 | 341 | IPR003018 | GO:0005515 | |
| Alju03g3378 | 759 | Pfam | GAF domain | 184 | 331 | IPR003018 | GO:0005515 | |
| Alju03g3378 | 759 | SMART | REC_2 | 633 | 748 | IPR001789 | GO:0000160 | |
| Alju03g3378 | 759 | ProSiteProfiles | Histidine kinase domain profile. | 374 | 609 | IPR005467 | - | |
| Alju03g3378 | 759 | ProSiteProfiles | Response regulatory domain profile. | 634 | 752 | IPR001789 | GO:0000160 | |
| Alju03g3378 | 759 | Coils | Coil | 337 | 367 | - | - | |
| Alju03g3378 | 759 | CDD | HATPase_ETR2_ERS2-EIN4-like | 473 | 607 | - | - | |
| Alju03g3378 | 759 | SUPERFAMILY | CheY-like | 630 | 753 | IPR011006 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Alju03g3378 | Alju-ChrAlju03 | 57583962 | 57588446 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Alju03g3378 | 22 | 757 | Miscellaneous Gene Families | AT3G04580 | 62.968 | 0.0 | 920 |
Transcription factors information