Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Alju03g3371 | ATGGTTGCAGTCAATATTGACCATGTTTTACCAAAGAAAAAGAGTGATGCAAGCCATGACGACACAACATTACTGGCTCATCACCCCATGCCACCAAAGGTGAGTTCAAACCCTATGATGTGTGAGCAACTCAAAGGTCAATATCAGTTGTGCCAAGAGATCGGTCGTGGTCGGTTCGGCACCGTCTTCCGCTGCTTCCACCCCGTCTCTAACGACTTCTTCGCCTGCAAAGTCATCGACAAGCGCCTCCTCACCGATTCCATTGATCGCGAGTGCCTCCAGAATGAACCCAAGTACATGGCCCTCCTCTCCCCCCACCCTCATATTCTTCAGATTTTTGACGTCTTCGAGAACGACGATTACCTCTCTGTCGTCCTCGAGCTCTGTGAGCCCCTCACCCTCCTCGACCGCATCATCGATCGCCCCTTGCTGGAGACCGAGGCCGCTTCCATCATGAAGCAGCTCCTAGAGGCAGTCGCCCATTGCCATCGGCTGGGCATAGCCCACAGAGACATCAAACCCGACAATATTTTGTTCGATTCCCAGAATAATCTTAAGGTCGCCGACTTTGGGTCCGCTGAGCGGTTCGGCGACGGAGGGACCATGACCGGGGTGGTGGGGACGCCGCATTATGTGGCGCCGGAGGTGCTGTTGGGGAGACAGTACGACGAGAAAGTAGATGTATGGAGTAGCGGGGTGATATTGTACATAATGTTGTCTGGGGTTCCGCCCTATTATGGAGAATCGGCCGAAGAGATCTTTGAGGCTGTGTTGAGGGCGAATCTGAGGTTTCCATCTAGGATTTTCAGGTCCGTGTCTTCCGCCGCTAAGGATCTAATGAGGAAGATGATGTGTAGGGATGCGTCCAGGCGATTATCCGCAGAGCAAGCCATGAGGCACCCTTGGATCCTGAATGGAGGAGAGGCCACCGATCTGACTTGA | 942 | 0.534 | MVAVNIDHVLPKKKSDASHDDTTLLAHHPMPPKVSSNPMMCEQLKGQYQLCQEIGRGRFGTVFRCFHPVSNDFFACKVIDKRLLTDSIDRECLQNEPKYMALLSPHPHILQIFDVFENDDYLSVVLELCEPLTLLDRIIDRPLLETEAASIMKQLLEAVAHCHRLGIAHRDIKPDNILFDSQNNLKVADFGSAERFGDGGTMTGVVGTPHYVAPEVLLGRQYDEKVDVWSSGVILYIMLSGVPPYYGESAEEIFEAVLRANLRFPSRIFRSVSSAAKDLMRKMMCRDASRRLSAEQAMRHPWILNGGEATDLT | 313 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Alju03g3371 | 313 | FunFam | Phosphoenolpyruvate carboxylase kinase 1 | 40 | 130 | - | - | |
| Alju03g3371 | 313 | CDD | STKc_CAMK | 47 | 302 | - | - | |
| Alju03g3371 | 313 | SMART | serkin_6 | 48 | 303 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Alju03g3371 | 313 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 167 | 179 | IPR008271 | GO:0004672|GO:0006468 | |
| Alju03g3371 | 313 | ProSiteProfiles | Protein kinase domain profile. | 48 | 303 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Alju03g3371 | 313 | Pfam | Protein kinase domain | 48 | 303 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Alju03g3371 | 313 | Gene3D | Phosphorylase Kinase; domain 1 | 18 | 130 | - | - | |
| Alju03g3371 | 313 | Gene3D | Transferase(Phosphotransferase) domain 1 | 133 | 311 | - | - | |
| Alju03g3371 | 313 | ProSitePatterns | Protein kinases ATP-binding region signature. | 54 | 77 | IPR017441 | GO:0005524 | |
| Alju03g3371 | 313 | SUPERFAMILY | Protein kinase-like (PK-like) | 42 | 305 | IPR011009 | - | |
| Alju03g3371 | 313 | FunFam | Phosphoenolpyruvate carboxylase kinase 2 | 40 | 313 | - | - | |
| Alju03g3371 | 313 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 41 | 308 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Alju03g3371 | Alju-ChrAlju03 | 57553407 | 57554982 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Alju03g3371 | 26 | 311 | EF-hand Containing Proteins | AT1G50700 | 38.966 | 8.65e-73 | 230 |
Transcription factors information