Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g3366 ATGCCTGGGTATCGAAATGACTATCGGCTCTTTTGTGGTGATCTTGGTAATGAGGTGAATGATGATGTTCTTTCAAAAGCATTTTCTCGATTTCCTTCCTTTAACATGGCACGAGCTGTCAGAGACAAGCGAACTGGAAAAACAAAGGGTTATGGATTTGTAAGCTTTGCCAATCCTGCTGACCTTGCTGCTGCTCTTAAAGAAATGAATGAACCAAGCACAGAAGAAATTGAAATTTCCCAGGAAGAGGATACTGCACAAGTAACTGAGTCCGGATTATCAAATGCACAAATCATGAATCGATTGATCGAAGATATTTCACCAAAACAAAATTTTATAATACATTCACCAGCAACGAAGCCTAGAATAGATTTGACCCAACAGAAAAAGAAAAAAAAAATTGTGCCTTGA 411 0.382 MPGYRNDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARAVRDKRTGKTKGYGFVSFANPADLAAALKEMNEPSTEEIEISQEEDTAQVTESGLSNAQIMNRLIEDISPKQNFIIHSPATKPRIDLTQQKKKKKIVP 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g3366 136 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 8 84 IPR000504 GO:0003723
Alju03g3366 136 PANTHER TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED 6 84 - -
Alju03g3366 136 MobiDBLite consensus disorder prediction 117 136 - -
Alju03g3366 136 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 10 71 IPR000504 GO:0003723
Alju03g3366 136 SMART rrm1_1 9 80 IPR000504 GO:0003723
Alju03g3366 136 SUPERFAMILY RNA-binding domain, RBD 5 71 IPR035979 GO:0003676
Alju03g3366 136 Gene3D - 2 80 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g3366 Alju-ChrAlju03 57512082 57515453 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g3366 10 70 Eukaryotic Initiation Factors Gene Family AT4G34110 40.984 3.74e-09 52.0