Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g3361 ATGCTTTTCTGTTCATTAGTGTATGGTCTTCGAGTCAAATGGAGCAGGTTTTGTTTACCCTTTCTTTCTTTCAACCAGATGTCTTCACTCGTCAGTTTATGGTTTGTTGATCTTTTGATAGCAAATAGTACGTGAACTGTTACGCTTATATTCAGCTTGCTAGGAACATTTTATCTGTTTTCTGGTATTTCGGTGGCCAACTTAGCCGTTTTCTACTCACAGTTGCACAAGCTTATGCTAATGAGTAGAGAAGTCTTGGACGCATGTTCTCAACTCCTGCTGAGTGCCCCGAAGACATCTCTTTTTACCTTAGTTTCACTACGTGATCAACAGTTTCAAGATTCTCCCATCATTTCTCAGAAATCAACCGACAACGGGTCCTTCCTACCTACCCATTCTTCTCCTTCAGAAATGCATTCTAAAACATTCATTCCCCATTCCCAGGAAAATGATGAAATTTCCTGGGGATCATATCCACTTCAGGATATTCTTGATTTTCCTGAAATTGCTTCTGTCCAGAACGATCAGTTGGAAAATAGTTCTTGTTACATACCGGATGACAATACTAAGAAAACTGATCTTGTGGAATGGGTTGATCAGTTAATGTCAGTTGATGATTCTCTGCACCCACATTGGAGTCAGTTTCTTGGTGATGATGATGTCACATATTCAAAATCAAAGGAGTCCCAGGTTTCCCAGCAGCAGCGTGTACCATCTGAAGAAGTTAACGCCCTTAATAATTCGGTGTCAACTGCACCGCAAACTAAGCCAAGAATGCGTTGGACTCCAGAACTTCATGAGTCCTTTGTCGAAGCAGTTAATCAGCTTGGTGGCAAGGCTACTCCTAAGGGTGTCTTGAACCTGATGAAAGTCAAGGGCCTTAGCATCTATCATGTGAAAAGCCACCTACAGAAGTATAGAACTGCCAGATACAAACCTGAGTCATCCAAAGGAACTTCTGAGAAAAAGTTGACATCAATTGAAGAAATGAAATATCTAGACTTGAAAACGAGTATGGGGATCACTGAAGCTCTACGGTTGCAAATGGAATTACAAAAACGACTTCACGAGCAACTTGAGATTCAAAGGAAATTGCAGATTCAGATTGAGAACCAAGGCAAGCGTCTTCAGATGATGTTTGAGAGCCAAAGAGAAATGGAGGAGGGCAAGCTCAAGGGGTCCTCCTCCTTGGATGAGCCTTCTGCACCCTTACCAAATAAGGTTGAAAATTCAGAAATGTCAAATGAGGAACGTGATAAATCAGGAACTGAAGGAAGTTCCCAGGGTGGAAGCACAAAGCTAAAAGAAGATGACAACAAGGTTGGACAGGAGTTGGGAGAAGATCGGTTTAAGGGACCGCCCACAAAACGTGTTAGGAGTTGA 1383 0.4201 MLFCSLVYGLRVKWSRFCLPFLSFNQMSSLVSLWFVDLLIANSTXTVTLIFSLLGTFYLFSGISVANLAVFYSQLHKLMLMSREVLDACSQLLLSAPKTSLFTLVSLRDQQFQDSPIISQKSTDNGSFLPTHSSPSEMHSKTFIPHSQENDEISWGSYPLQDILDFPEIASVQNDQLENSSCYIPDDNTKKTDLVEWVDQLMSVDDSLHPHWSQFLGDDDVTYSKSKESQVSQQQRVPSEEVNALNNSVSTAPQTKPRMRWTPELHESFVEAVNQLGGKATPKGVLNLMKVKGLSIYHVKSHLQKYRTARYKPESSKGTSEKKLTSIEEMKYLDLKTSMGITEALRLQMELQKRLHEQLEIQRKLQIQIENQGKRLQMMFESQREMEEGKLKGSSSLDEPSAPLPNKVENSEMSNEERDKSGTEGSSQGGSTKLKEDDNKVGQELGEDRFKGPPTKRVRS 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g3361 460 NCBIfam myb-like DNA-binding domain, SHAQKYF class 256 308 IPR006447 GO:0003677
Alju03g3361 460 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 254 311 IPR017930 -
Alju03g3361 460 MobiDBLite consensus disorder prediction 378 460 - -
Alju03g3361 460 Pfam MYB-CC type transfactor, LHEQLE motif 339 385 IPR025756 -
Alju03g3361 460 SUPERFAMILY Homeodomain-like 254 308 IPR009057 -
Alju03g3361 460 MobiDBLite consensus disorder prediction 380 394 - -
Alju03g3361 460 FunFam Myb family transcription factor 255 311 - -
Alju03g3361 460 Pfam Myb-like DNA-binding domain 258 307 IPR001005 -
Alju03g3361 460 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 232 423 IPR044848 GO:0003700
Alju03g3361 460 MobiDBLite consensus disorder prediction 431 460 - -
Alju03g3361 460 Coils Coil 342 362 - -
Alju03g3361 460 Gene3D - 255 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g3361 Alju-ChrAlju03 57459220 57462342 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g3361 135 444 G2-like Transcription Factor Family AT3G04450 46.313 3.01e-79 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Alju03g3361 Myb_DNA-binding 2.5e-08 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju03g3361 03 57459220 57462342 Alju03g2773 03 53473328 53483565 CCT
Alju03g3361 03 57459220 57462342 Alju03g3361 03 57459220 57462342 ECH