Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g3354 ATGGTGATTCCGTATTGCCATCTGCAGGGGACACCTGTGAATATTATTGTAGGTTCTCATGTCTGGGTTGAAGATCCGGATGTATCTTGGATTGATGGAGTGGTATCAAAAATCACTGGAAAAGATGCAGAAATTGAAACTAGCGATGGAAAAAAGGTGGTCGCAAAATTATCAAAAATATATCCCAAAGATATGGAAGCTCCTGCTGGCGGAGTGGATGACATGACTAAGCTGTCCTATTTACATGAGCCTGGGGTCCTGCAGAACTTAAAATCTAGATACGAATTGAATGAAATATATACTTATACTGGAAATATTTTAATTGCCATAAATCCATTCCAAAGACTACCTCATATCTATGATGCTCACATGATGCAACAATACAAGGGAGCCCCATTTGGAGAACTAAGTCCTCACGTGTTTGCAGTTGCTGATGTTGCATTTAGGGCAATGATTAATGAAGGAAAAAGCAATTCAATTCTTGTCAGTGGGGAAAGTGGAGCTGGTAAAACTGAAACTACAAAAATGCTTATGAGATACCTTGCTTACCTGGGTGGCAGGGCTGCTACTGAAGGAAGAACAGTTGAACAACAAGTTCTTGAATCAAATCCGGTTCTTGAAGCATTTGGCAATGCAAAAACAGTTAGGAATAACAACTCCAGCCGTTTTGGAAAATTTGTTGAGATCCAATTTGATAAAAGTGGAAGAATCTCGGGAGCGGCAATTCGAACTTACCTTCTGGAGAGGTCTCGAGTTTGCCAAATTAATGATCCTGAACGCAACTACCACTGCTTCTATCTTCTTTGTGCTGCACCACAGGAGGAAATAGAGAGATACAAATTAGGACCTCCCAAATCATTTCATTACCTTAACCAGTCAAATTGTTATGAACTGGTTGATTCTAGTGATTCTCGTGAGTATCTTGCCACCAGGAGGGCTATGGATATCGTTGGAATAAGCCAAAAAGATCAGGAAGCAATTTTCAGAGTTGTTGCTGCTATTCTTCATCTTGGTAACATTGCTTTTTCCAAAGGAAAAGAAGTTGACTCATCAGTTCTCAAAGATGACAAAGCCAAATTCCACCTGGCAACAACTGCTGAACTTCTCATGTGTAATGCTGATGCCTTGCAAGATGCTTTATGTAAACGTGTGATGATCACCCCTGAAGAAGTTATAAAGCGAAGCCTTGATCCCCAAAGTGCAGCAATAAGTAGAGATGGCCTGGCTAAAACAATTTATTCTCGGCTATTTGACTGGCTGGTGGACAAGATTAATAGTTCAATCGGACAAGATCCTAATTCCAAATGTTTAATTGGAGTCCTTGATATCTATGGTTTTGAAAGTTTTAAAACTAACAGTTTTGAGCAGTTCTGCATTAATTTCACAAACGAGAAGTTGCAGCAGCATTTCAATCAGCACGTCTTTAAAATGGAACAAGAAGAATATACAAAGGAGAAGATTAATTGGAGCTATATTGAATTTGTTGATAATCAAGATGTTCTGGATCTCATTGAAAAGAAACCTGGAGGAATCATTGCTCTCCTCGATGAAGCTTGCATGTTTCCTAAGTCAACACACGAAACATTTGCTAACAAGCTTTATCAAACATTCAAGAATCACAAGCGCTTTGTAAAGCCAAAATTGTCTCGATCAGATTTTGCAATTGCTCATTATGCTGGGGAGGTCTTATACCAGTCTAATCAATTTTTAGACAAAAACAAGGATTATGTGGTTGCTGAACATCAAGATTTGTTGGGTGCTTCCAAATGTCCCTTTGTAGCAGGACTTTTTCCTCCGCTTCCAGAAGAGACGTCTAAATCTTCCAAATTTTCTTCAATTGCATCTCGTTTTAAGCTACAACTACAATCACTAATGGAAACACTAAACTCTACAGAGCCTCATTACATCAGATGTGTGAAACCAAACAACCTTCTCAAGCCTGCAATATTTGAGAATGCCAACGTTATGCAACAACTTCGCTGTGGTGGTGTTTTAGAGGCAATCAGAATCAGTTGTGCTGGCTATCCTACTCGCCGTGCTTTCTTTGAATTTGTAAATCGATTTGGCCTCCTTGCCCCAGAGGCCATGGAAGGCAACACCGACGAAAAGGTTGCTTGCCAAAAGATTCTGGAAAAAATGGGGCTGCAAGGGTATCAGATTGGTAAAACAAAGGTATTCCTGAGAGCTGGCCAAATGGCTGAACTGGACGCACGGAGAGCTCAAGTACTCAGCAATGCAGCAAAAATCATCCAACGGCGCATACGAACCCATCAAGCTCGTAATCATTATCTTTCTTTGAGAAAGATTACCATATACATGCAGTCTGTGTGTCGAGGAAGGCTAGCATGCAAACTCTTTGACAACATGAGAAAGGTGGCTGCTGCTAAGAAAATTCAGAAGAACGTACGCCGATATCAAGCTAGGAAAGCCTATAAAAGACTCCATGCAACAGTACTTACCTTGCAAATGGGTTTAAGGGCAATGGCTGCACGTAAGGAATTCAGATTTAGGAAGCGGTCTAAAGCTGCCATTGCTATTCAGGCTCGGTGGCGATGCCACAAAGCTTCCTCATACTATAAGAGGCTCATGAAAGCTGCGATAACTACACAATGCAGATGGAGAGGCCGTGTAGCAAGGAGGGAACTTAGGAAGCTAAAAATGGCAAAAACTGGTGCACTTCAAGAAGCGAAGGATAAGCTTGAAAAACGAGTAGAGGAACTCACTTGGCGTCTCCAACTAGAAAAAAGCTTAAGGACCAACCTAGAAGAAGCCAAAGCACAAGAGGTAGCGAAGCTGCAGAATTCTTTAAAGGAGATGCAGACCAAAGTTGATGAAACCAATGCCGTACTTGTCAAAGAGAGAGATAATGCAAAGAAAGCTACTGAAGAAGCACCTCCTGTTATTCAGGAGACCCAGGTTATTGTTGAAGACACACAAAAAATTGAATCACTAACAGCAGAAGTTGAGAGCTTGAAGACCTCGCTCCAGTCAGAAAAAGAGAGAGCTGATGACTTTGAAAGAAAATACAATGAAGCCCAAGTCTCTAGTGAAGAGAAGGGTAAAAAATTAGAAGACACAGAGAAGAAGGTTCGTCAGCTACAAGAATCATTAACCAGGCTAGAAGAGAAGACTACTAATTTAGAATCAGAGAATCGGGTTCTACGTCAACAAGCTGTGTCCATGGCACCCAATAAGTTACTTTCAGGACGCTCTAGATCTATTATTCAGAGAAGTGCTGAAGGTGTGATTCACGTTGGAGGGGAAGGAAGGGCACCTTTGGATCTACATAGCCCATCGATGATTCAGAGGGAACACTATGAAATGGAGGATAGGCCACAAAAGTCACTAAATGAAAAACAACAGGAGAATCAGGAGTTACTCATCAGATGTATTTTACAACCTCTGGGCTTTGCTGGCAAGAGACCGGTTGCAGCCTGTATCATATACAAATGCCTCTTGCAATGGCGATCATTTGAAGTAGATCGTACTACCATTTTTGATCGTATTCTTCAAACTATTGCCCATGCAATTGAGACCCCCGAGAACAATGATTTCTTGGCTTACTGGCTGTCCAACGGCTCTACACTTCTGTTGCTACTCCAGCGCACCCTCAAGGCAAGCAGTGCCGCCGGAATGGCTCCGCAACGCCGTCGTTCAGCAACACTGTTTGGGAGGATGACACAAAGTTTCCGGGGAGCTCCACCAGGAGTGAACCTTGCCCTAATGCACGGAAGCGGGGGAGTTGATACATTGAGACAAGTGGAGGCAAAGTACCCAGCTCTTCTATTCAAGCAGCAGCTGACAGCATATGTGGAAAAGTTCTACGGAATGATTCGAGACAACTTGAAGAAAGAAATATCTCCCTTGCTTTCTTTATGCATCCAGGCACCCAGAACTTCGAGAGCAGGCCTGGTTAAAGGACCACGCTCTGTTGCAAACACGGAAGCCCAGCGAGCTTTGATTGGTCACTGGCAGGCCATCGTCAAGAGCCTCGCCAACTTCCTTAACATTTTAAAAGCAAATCATGTTCCTCCCTTTTTAGTTCGAAAGGTGTTCACTCAGATATTTTCTTTTATCAACGTCCAGCTATTCAACAGTCTTCTGTTAAGACGGGAGTGCTGCTCATTCAGCAATGGGGAATATGTGAAAGCGGGTTTGGCTGAATTGGAGAACTGGTGTTATAAAGCAACGGAAGAGTATGCAGGTCCAGCCTTTGATGAGCTCAAGCATATTAGGCAGGCTATTGGATTCCTGGTGATCCATCAGAAACCAAAGAAAACGCTGAATGAAATAAGTCATGACCTCTGCCCGGTCCTCAGCGTACAGCAGCTATATCGGATAAGTACCATGTACTGGGATGACAAATATGGCACGCACAGCTTGTCCAACGATGTAATAGTGAGAATGAGAGCGCTCATGGCTGAAGATTCAAACAATGCCGCCAATAATTCTTTCCTGCTGGATGATGATTCCAGTATTCCATTTTCGGTGGATGACATATCAAAGTCAATGGAGCAAATAGAGATTGCCGATATTGAACCCCCACCGCTCATTCGAGAGAACTCTGGCTTTAGTTTCTTGCTCCCAAACAACAACTGA 4599 0.4253 MVIPYCHLQGTPVNIIVGSHVWVEDPDVSWIDGVVSKITGKDAEIETSDGKKVVAKLSKIYPKDMEAPAGGVDDMTKLSYLHEPGVLQNLKSRYELNEIYTYTGNILIAINPFQRLPHIYDAHMMQQYKGAPFGELSPHVFAVADVAFRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRAATEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAIRTYLLERSRVCQINDPERNYHCFYLLCAAPQEEIERYKLGPPKSFHYLNQSNCYELVDSSDSREYLATRRAMDIVGISQKDQEAIFRVVAAILHLGNIAFSKGKEVDSSVLKDDKAKFHLATTAELLMCNADALQDALCKRVMITPEEVIKRSLDPQSAAISRDGLAKTIYSRLFDWLVDKINSSIGQDPNSKCLIGVLDIYGFESFKTNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEKINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFANKLYQTFKNHKRFVKPKLSRSDFAIAHYAGEVLYQSNQFLDKNKDYVVAEHQDLLGASKCPFVAGLFPPLPEETSKSSKFSSIASRFKLQLQSLMETLNSTEPHYIRCVKPNNLLKPAIFENANVMQQLRCGGVLEAIRISCAGYPTRRAFFEFVNRFGLLAPEAMEGNTDEKVACQKILEKMGLQGYQIGKTKVFLRAGQMAELDARRAQVLSNAAKIIQRRIRTHQARNHYLSLRKITIYMQSVCRGRLACKLFDNMRKVAAAKKIQKNVRRYQARKAYKRLHATVLTLQMGLRAMAARKEFRFRKRSKAAIAIQARWRCHKASSYYKRLMKAAITTQCRWRGRVARRELRKLKMAKTGALQEAKDKLEKRVEELTWRLQLEKSLRTNLEEAKAQEVAKLQNSLKEMQTKVDETNAVLVKERDNAKKATEEAPPVIQETQVIVEDTQKIESLTAEVESLKTSLQSEKERADDFERKYNEAQVSSEEKGKKLEDTEKKVRQLQESLTRLEEKTTNLESENRVLRQQAVSMAPNKLLSGRSRSIIQRSAEGVIHVGGEGRAPLDLHSPSMIQREHYEMEDRPQKSLNEKQQENQELLIRCILQPLGFAGKRPVAACIIYKCLLQWRSFEVDRTTIFDRILQTIAHAIETPENNDFLAYWLSNGSTLLLLLQRTLKASSAAGMAPQRRRSATLFGRMTQSFRGAPPGVNLALMHGSGGVDTLRQVEAKYPALLFKQQLTAYVEKFYGMIRDNLKKEISPLLSLCIQAPRTSRAGLVKGPRSVANTEAQRALIGHWQAIVKSLANFLNILKANHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLAELENWCYKATEEYAGPAFDELKHIRQAIGFLVIHQKPKKTLNEISHDLCPVLSVQQLYRISTMYWDDKYGTHSLSNDVIVRMRALMAEDSNNAANNSFLLDDDSSIPFSVDDISKSMEQIEIADIEPPPLIRENSGFSFLLPNNN 1532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g3354 1532 ProSiteProfiles IQ motif profile. 839 868 IPR000048 GO:0005515
Alju03g3354 1532 FunFam unconventional myosin-Va 841 889 - -
Alju03g3354 1532 SMART MYSc_2a 65 741 IPR001609 GO:0003774|GO:0005524|GO:0016459
Alju03g3354 1532 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 16 65 IPR004009 GO:0003774|GO:0005524|GO:0016459
Alju03g3354 1532 ProSiteProfiles IQ motif profile. 814 843 IPR000048 GO:0005515
Alju03g3354 1532 ProSiteProfiles Dilute domain profile. 1167 1475 IPR002710 -
Alju03g3354 1532 Gene3D - 447 631 - -
Alju03g3354 1532 ProSiteProfiles IQ motif profile. 743 770 IPR000048 GO:0005515
Alju03g3354 1532 Coils Coil 890 917 - -
Alju03g3354 1532 Gene3D - 260 318 - -
Alju03g3354 1532 ProSiteProfiles IQ motif profile. 862 891 IPR000048 GO:0005515
Alju03g3354 1532 PANTHER MYOSIN 62 1463 - -
Alju03g3354 1532 SMART DIL_2 1350 1457 IPR002710 -
Alju03g3354 1532 MobiDBLite consensus disorder prediction 994 1027 - -
Alju03g3354 1532 Pfam Myosin head (motor domain) 72 728 IPR001609 GO:0003774|GO:0005524|GO:0016459
Alju03g3354 1532 FunFam unconventional myosin-Va 745 792 - -
Alju03g3354 1532 ProSiteProfiles IQ motif profile. 791 820 IPR000048 GO:0005515
Alju03g3354 1532 Pfam Myosin N-terminal SH3-like domain 17 59 IPR004009 GO:0003774|GO:0005524|GO:0016459
Alju03g3354 1532 Gene3D Kinesin motor domain 73 670 IPR036961 -
Alju03g3354 1532 Gene3D - 841 890 - -
Alju03g3354 1532 Gene3D - 793 840 - -
Alju03g3354 1532 Gene3D - 742 792 - -
Alju03g3354 1532 SMART iq_5 813 835 IPR000048 GO:0005515
Alju03g3354 1532 SMART iq_5 765 787 IPR000048 GO:0005515
Alju03g3354 1532 SMART iq_5 742 764 IPR000048 GO:0005515
Alju03g3354 1532 SMART iq_5 838 860 IPR000048 GO:0005515
Alju03g3354 1532 SMART iq_5 790 812 IPR000048 GO:0005515
Alju03g3354 1532 SMART iq_5 861 883 IPR000048 GO:0005515
Alju03g3354 1532 FunFam Myosin 2 320 433 - -
Alju03g3354 1532 Pfam IQ calmodulin-binding motif 745 763 IPR000048 GO:0005515
Alju03g3354 1532 Pfam IQ calmodulin-binding motif 864 883 IPR000048 GO:0005515
Alju03g3354 1532 Pfam IQ calmodulin-binding motif 841 860 IPR000048 GO:0005515
Alju03g3354 1532 Pfam IQ calmodulin-binding motif 793 812 IPR000048 GO:0005515
Alju03g3354 1532 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 791 888 IPR027417 -
Alju03g3354 1532 FunFam unconventional myosin-Va 793 840 - -
Alju03g3354 1532 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 793 IPR027417 -
Alju03g3354 1532 PRINTS Myosin heavy chain signature 490 518 IPR001609 GO:0003774|GO:0005524|GO:0016459
Alju03g3354 1532 PRINTS Myosin heavy chain signature 100 119 IPR001609 GO:0003774|GO:0005524|GO:0016459
Alju03g3354 1532 PRINTS Myosin heavy chain signature 437 465 IPR001609 GO:0003774|GO:0005524|GO:0016459
Alju03g3354 1532 PRINTS Myosin heavy chain signature 157 182 IPR001609 GO:0003774|GO:0005524|GO:0016459
Alju03g3354 1532 PRINTS Myosin heavy chain signature 204 231 IPR001609 GO:0003774|GO:0005524|GO:0016459
Alju03g3354 1532 Pfam DIL domain 1351 1454 IPR002710 -
Alju03g3354 1532 CDD MyosinXI_CBD 1118 1498 IPR037975 GO:0007015
Alju03g3354 1532 FunFam Class V myosin 447 584 - -
Alju03g3354 1532 Coils Coil 974 1057 - -
Alju03g3354 1532 Coils Coil 922 963 - -
Alju03g3354 1532 Gene3D Myosin VI head, motor domain, U50 subdomain 320 609 - -
Alju03g3354 1532 ProSiteProfiles Myosin motor domain profile. 70 740 IPR001609 GO:0003774|GO:0005524|GO:0016459
Alju03g3354 1532 Gene3D - 675 741 - -
Alju03g3354 1532 CDD MYSc_Myo11 84 728 IPR036018 -
Alju03g3354 1532 FunFam Myosin heavy chain 260 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g3354 Alju-ChrAlju03 57424464 57434631 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g3354 10 1529 Myosins gene family AT1G54560 81.770 0.0 2618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju03g3354 03 57424464 57434631 Alju03g2743 03 53278461 53293182 CCT
Alju03g3354 03 57424464 57434631 Alju03g3354 03 57424464 57434631 ECH