Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g3331 ATGTTCGATAGAGTGCCAGAACAGTTCCACCAATTCATAGCCCCAAGAACCTCATCACTTCCACTTCACCCATCACTCCCTCCCTTCGATGCTTACAACCCTTCTCATCATCACTTGCCCCTCCCGCCGCCGCCTCCGCCGCCAAATCTCCTGTCCCCATTGCACCTCAAAGACGAACAACACGAACAGCAACAAACTAGCATGAACTTCGAGATTAATGAAAGAGAACCACGATTGGGCGAGCATGAGCTGATTGATTCCACCAGCTGGACCGACGATGAGGTGCTTGCTCTTTTGAGGATCAGATCTGACCTCGACACTTGGTTCCCTGAACTCACTTGGGAACATGTTTCAAGGAAGCTTGCAGAGCTTGGATTTAAAAGGAGTGCAGAGAAGTGCAAGGAGAAGTTCGAAGAGGAAACCAGTTACTTGAACAACATCCATTACACCAAGAACAACGGTTACCGCTTTATTAGTGAGCTCGAACAGCTTTACCAACAACAAGAAGCACATCAAATCGCTGGGGTGGAGGTCGAGGTCGAGGTTGGGTCTCAAGAGAGTAAGCAGCTGCCGGAAAAGCCGGTTGAGGAACAACAAGGGAAGATGGATCACACATTAGAGGATGGCTCAGCAAATGACAACGACGACGCATCATTGTCCAAAAAATGTGAGGAAACTGTGAAGATAGCGGGGACGTCAAAGCACAAGAAGCGAAAGAGGAACGATAAGTTTGAGATTTTGAAGGGTTTTTGCGAGAACATGGTGAACAAAATGATGGCAAAGCAAGAACAGATGCACAATAAGCTGCTGGAGGACATGATTAAAAGAGACCAAGAGATATTCGCGAGACAGGAGGCTTGGAAGAAACAGGAGATGGATGGCATGAACTGGGAGCTCGAAATGATGGCTAAAGAGCAGGCTGTTGCGGGCCAAAGGCAAGCCGCCATTATTGATTTGTTGAAGAAAATTTCAGACCAGAGCCAATATTATTGTACCAAAAGGGTATCAGACGATCCCAATCCAAATTCAGTGCAGGCTGCTTCCCCGTCGAACTCACAAAACCCTAATCCATGTAGTAATTATACCGGGGAGAACAATCCCGAACCGCCGTTACGCGTGGTTCTTAATTGTACAAGCGAAGGCGCAGCGGATAAAAAGCCTGATAGTTCGAGCGAAGTTCCTAATCCCTCTTCAAATGATTGCGATCCAGCCGCAGCAGTTACCCGGAACCCTAACTGTGTGAGTGCACAGTCAGATGGAGTGCCCGGAAAAACAGGTTCGACGCAGAAAGGCGGGTCAGATAAGTGCATGAGGAGAGAGAAAGAAGAGGTGGGAAGAAGATGGCCAAGAGAGGAAGTAGTGGCACTGATAAACCTGAGAAGCAGTGCGAACGAAGAGAGAGAAGGAGGAGGGAGCAGCAGCAGGGTTCCTCTGTGGGAGAGAATATCGGAAGGGATGAGGGAAATGGGATATAACAGAAGCGCCAAGAGGTGCAAAGAGAAATGGGAGAACATAAACAAATACTTCAGGAAGACGAAGCATCTGAGTAAGAAAAGGTCCCTGGATTCTAGAACCTGTCCCTACTTCCATCAGCTCACTTCTTTGTATTCTCAATGA 1617 0.4793 MFDRVPEQFHQFIAPRTSSLPLHPSLPPFDAYNPSHHHLPLPPPPPPPNLLSPLHLKDEQHEQQQTSMNFEINEREPRLGEHELIDSTSWTDDEVLALLRIRSDLDTWFPELTWEHVSRKLAELGFKRSAEKCKEKFEEETSYLNNIHYTKNNGYRFISELEQLYQQQEAHQIAGVEVEVEVGSQESKQLPEKPVEEQQGKMDHTLEDGSANDNDDASLSKKCEETVKIAGTSKHKKRKRNDKFEILKGFCENMVNKMMAKQEQMHNKLLEDMIKRDQEIFARQEAWKKQEMDGMNWELEMMAKEQAVAGQRQAAIIDLLKKISDQSQYYCTKRVSDDPNPNSVQAASPSNSQNPNPCSNYTGENNPEPPLRVVLNCTSEGAADKKPDSSSEVPNPSSNDCDPAAAVTRNPNCVSAQSDGVPGKTGSTQKGGSDKCMRREKEEVGRRWPREEVVALINLRSSANEEREGGGSSSRVPLWERISEGMREMGYNRSAKRCKEKWENINKYFRKTKHLSKKRSLDSRTCPYFHQLTSLYSQ 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g3331 538 CDD GT1 446 513 - -
Alju03g3331 538 PANTHER FI21293P1 59 537 - -
Alju03g3331 538 Gene3D - 90 144 - -
Alju03g3331 538 Gene3D - 448 511 - -
Alju03g3331 538 Pfam Myb/SANT-like DNA-binding domain 88 149 IPR044822 -
Alju03g3331 538 Pfam Myb/SANT-like DNA-binding domain 446 534 IPR044822 -
Alju03g3331 538 MobiDBLite consensus disorder prediction 390 432 - -
Alju03g3331 538 ProSiteProfiles Myb-like domain profile. 447 506 IPR001005 -
Alju03g3331 538 MobiDBLite consensus disorder prediction 37 52 - -
Alju03g3331 538 MobiDBLite consensus disorder prediction 23 54 - -
Alju03g3331 538 MobiDBLite consensus disorder prediction 333 443 - -
Alju03g3331 538 ProSiteProfiles Myb-like domain profile. 82 141 IPR001005 -
Alju03g3331 538 FunFam Trihelix transcription factor GT-2 90 146 - -
Alju03g3331 538 SMART sant 86 143 IPR001005 -
Alju03g3331 538 SMART sant 444 508 IPR001005 -
Alju03g3331 538 MobiDBLite consensus disorder prediction 333 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g3331 Alju-ChrAlju03 57270439 57272512 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g3331 90 538 Trihelix Transcription Factor Family AT5G28300 36.492 5.02e-77 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Alju03g3331 Myb_DNA-bind_4 3.1e-19 CL0123