Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g3318 ATGCCCATGGATGTCCTCGAGCTTGCCAAGAATGTGGACCGCATTTCATCTCAGGATCAGACCATGATGCACCAATTAGGGTTTCATTCATCCACAGACGTCTTTCTCTCGTCTGTGCTCCCCTGCAATTCAAAGGTCAATATGGCGGATAAGGCGGTGACGGTGAGAACACGAAAGTTCATGACCAACCGTCTCTTATCAAGAAAACAATTTGTCATTGATGTACTTCATCCTGGGAGGCCAAATGTATCCAAGGCGGAGCTTAAGGAAAAGCTAGCAAGGATGTATGATGTCAAAGACCCTAATGCGATTTTTGTCTTCAAGTTTAGAACTCACTTTGGAGGCGGGAAATCAACTGGTTTTGGTTTAATTTATGATTCCGTTGAAAATGCAAAGAAGTATGAGCCCAAGTATCGCCTTATCAGGAATGGACTCTCCACCAAGGTCGAGAAGTCAAGGAAACAGGTTAAAGAGCGCAAGAATCGTGCCAAGAAAATCCGTGGAGTAAAGAAGACTAAGGCATCTGAAGCTTCCAAGAAGAAATGA 546 0.4414 MPMDVLELAKNVDRISSQDQTMMHQLGFHSSTDVFLSSVLPCNSKVNMADKAVTVRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLARMYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLSTKVEKSRKQVKERKNRAKKIRGVKKTKASEASKKK 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g3318 181 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 53 155 IPR012678 GO:0003735|GO:0005840|GO:0006412
Alju03g3318 181 Hamap 30S ribosomal protein S24e [rps24e]. 51 153 IPR001976 GO:0003735|GO:0005840|GO:0006412
Alju03g3318 181 Gene3D - 45 180 - -
Alju03g3318 181 FunFam 40S ribosomal protein S24 48 181 - -
Alju03g3318 181 PANTHER 40S RIBOSOMAL PROTEIN S24 48 178 IPR001976 GO:0003735|GO:0005840|GO:0006412
Alju03g3318 181 MobiDBLite consensus disorder prediction 157 181 - -
Alju03g3318 181 ProSitePatterns Ribosomal protein S24e signature. 113 135 IPR018098 -
Alju03g3318 181 Pfam Ribosomal protein S24e 72 150 IPR001976 GO:0003735|GO:0005840|GO:0006412
Alju03g3318 181 MobiDBLite consensus disorder prediction 149 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g3318 Alju-ChrAlju03 57188961 57192517 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g3318 48 180 Cytoplasmic Ribosomal Protein Gene Family AT5G28060 86.466 5.37e-84 242