Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g3308 ATGAAGAACATTTTCAAGAGGCTTCACATTGGCAGCAATCACGATCCTAATCGATCCCATGAAGCTCCTCCTTCCTCCTCCTCCGCAGTAAACGCACAATCTGGCGTCTCCGATCTCCGTATCACTCCTCCTGTTCAGAATTCCGGTACTTCTATGCCTAGCCCCCCTTCTTCTTCACCATCGCCTTCCCCTGCTCCTCCTCCAGCTGGCAGCACTTCCACTCCCCAACCTTCCCAGTCCAATTTGCAAGACTATTTCTCTTCGGAGGAAGAGTTCCAGGTTCAGTTAGCGCTAGCCATCAGCGCTTCCAATTCGGAGTTCCGGGATGATCCTCAGAAGGATCAGATCCGAGCGGCAACGTTACTGAGCTTAGGAGGTCATCTAACTCATTTTGCAACGAATAAGGATCACGAAGCGGAGGCACTATCTAGGCAGTACTGGGAATACAATGTTCTTGACTATGAGGAGAGAGTGGCAGATGGTTTTTATGATGTATACAGCCTCAGTAATGATGCTGCAATGCAGAAGAAAATGCCATCTCTGGCAGATCTTGAAGGAAATCCTGGAAGTTCTAATTTTGAAGTTGTCGTGGTTAATAGAAAGATTGATCCCATCTTGGAAGAGCTGTTGCAAATTGCCCATTGCATTGCATTAGACTGCCCAGTCACCAAGGTCGGTGTTTTGGTACAAAGGCTTGCTGAACTTGTTACGGGGCATATGGGTGGTCCTGTAAAGGATGCTAATATTGCATTGGCGAAATGGATGGAAAGAAGTACGGAGCTAAGAACATCCCTTCACACAAGTGTATTGCCTCTTGGGTCCATAAATATTGGGCTATCCAGGCATCGGGCTTTGCTTTTCAAGGTATTAGCTGACAATATCAAGATGCCTTGTAGACTGGTAAAAGGCAGTCATTACACTGGTGTTGAGGATGATGCTGTGAACATAATAAAGTTGGATGATGAAAGGGAGTTTTTGGTTGATCTCATGGCTGCTCCTGGAGCACTTATCCCAGCTGACTTAAGTGCAAAGGATACCGCCTTTAAGCCATACAACCCCAAGATTTTGCCAAGTTTACAATCCAACGAAGAGAGTGAATTTTCTTACTCAAGACAAATATCATCTGATGGTGAAGGAAGTAGTCATTTTTCTGTGAAAAGAGGTGGTTCATCACCATTGACCGGAAAATCATCTTTTGAGAAGTCAGAAATGTCTTCAAAAACGAACTCAAGCAATGACACTGGTGCTATTGCTTCCAAAATGCCCAATGGAGCAACTTCCAGCCAACCAGAAAAATTGCCCCCATCAGCTGGCACTTTGCTGTACAAGGGAACTCTCGGAATGAATGCAATTGGTGATGGGACAAGATTGAATGCCAATATTGTACCCTATAGTCAGGATAGCCCAGACAACTCGAGGATCCTTTTTGCAGATCTTAACCCATTCCAGATAAAAGGAACTGGCAAGACCTCTGTACACAACAAGCCTGTGGAAAATAAGTCTCCTGAGCTTCAAATTATGAGAGATAATTCTGTCTCTGGCCAACCCCCAGTACCATTGATGTGGAAGAATCGTTATGCTTACAATGACACTCCCAAAAAAATCAACCGTGACCCTAGTGAATATAGTTCCCAATCGTCACATAATTCTAATATAAATAAAAATAGAAATACTCTCAATTTGATGGAAGTCACTGGTTCAGCATTGGCACCTGGTGCAGGTGAGCTGAACAGGGTTGAGGATCTCAAAGAGGAATGTAACAAAAGAAATGGAGTAGGTTTTGAAAATGACATGGTAGGTGTGGCTAAAGAACATGAGAACAATGAAATTAAGTTTCATGACTGGAGAAAGTGCACACATGACAGGTTCATGGGGAGCAATTTGAAATTAGAGGCCTCAGAGCGTCCAAGCTCACCAATTGATTCCGTTGCTATAGGGGGTGATCAAATATTGGATGATGTAGATGTGGGTGATTGTGAAATTCCATGGGAGGATTTGATTATTGGTGAAAGAATAGGTCTAGGTTCGTATGGTGAGGTATTCCGTGCTGACTGGAATGGCACTGAGGTTGCTGTTAAGAAGTTTCTGGATCAAGACTTTTTAGGCGCTGCATTGGCTGAATTCAAGAGAGAAGTACGGATCATGCGTCGATTGCGTCATCCAAATATTGTTCTTTTTATGGGTGCTGTTACTCGTCCTCCCAATCTCTCAATCATTTCAGAGTTTCTTCCAAGAGAAAGCTTGTACAAAATTCTTCATCGTCCTAATTGTCAGATTGACGAGAAGCGTAGAATTAAAATGGCTTTGGATGTGGCAAGAGGCATGAACTGCTTGCACACCAGCATGCCTACAATTGTTCACCGAGATCTGAAGTCGCCAAATCTTTTGGTTGATAATAACTGGAATGTCAAGGTTTGTGATTTTGGGTTATCACGCTTGAAGCATAGCACATTTTTGTCATCCAAGTCAACTGCTGGAACGCCTGAATGGATGGCTCCTGAAGTTCTCCGCAACGAGCCCTCAAATGAGAAGTGTGACGTTTATAGTTTTGGAGTCATCCTGTGGGAGCTTGCCACTTTAAGGTTGCCATGGAGTGGAATGAACCCTATGCAGGTTGTTGGTGCAGTTGGTTTCCAAAACCGTCGCCTAGAAATCCCCAAGGAAATTGACCCCGTTGTTGCAAGAATAATTTGGGAATGTTGGCAACAGGATCCAAATTTGCGCCCCTCATTTGCGCAGCTCACTGTGGTTTTAAAGTCCCTGCAGCGTTTAGTTAACCCATCTTATCAAGACCAGATGGCTTCGCCTCTGCCGCAGGAGATTTCTGTAAATTCCACCCCTTAG 2844 0.4423 MKNIFKRLHIGSNHDPNRSHEAPPSSSSAVNAQSGVSDLRITPPVQNSGTSMPSPPSSSPSPSPAPPPAGSTSTPQPSQSNLQDYFSSEEEFQVQLALAISASNSEFRDDPQKDQIRAATLLSLGGHLTHFATNKDHEAEALSRQYWEYNVLDYEERVADGFYDVYSLSNDAAMQKKMPSLADLEGNPGSSNFEVVVVNRKIDPILEELLQIAHCIALDCPVTKVGVLVQRLAELVTGHMGGPVKDANIALAKWMERSTELRTSLHTSVLPLGSINIGLSRHRALLFKVLADNIKMPCRLVKGSHYTGVEDDAVNIIKLDDEREFLVDLMAAPGALIPADLSAKDTAFKPYNPKILPSLQSNEESEFSYSRQISSDGEGSSHFSVKRGGSSPLTGKSSFEKSEMSSKTNSSNDTGAIASKMPNGATSSQPEKLPPSAGTLLYKGTLGMNAIGDGTRLNANIVPYSQDSPDNSRILFADLNPFQIKGTGKTSVHNKPVENKSPELQIMRDNSVSGQPPVPLMWKNRYAYNDTPKKINRDPSEYSSQSSHNSNINKNRNTLNLMEVTGSALAPGAGELNRVEDLKEECNKRNGVGFENDMVGVAKEHENNEIKFHDWRKCTHDRFMGSNLKLEASERPSSPIDSVAIGGDQILDDVDVGDCEIPWEDLIIGERIGLGSYGEVFRADWNGTEVAVKKFLDQDFLGAALAEFKREVRIMRRLRHPNIVLFMGAVTRPPNLSIISEFLPRESLYKILHRPNCQIDEKRRIKMALDVARGMNCLHTSMPTIVHRDLKSPNLLVDNNWNVKVCDFGLSRLKHSTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLRLPWSGMNPMQVVGAVGFQNRRLEIPKEIDPVVARIIWECWQQDPNLRPSFAQLTVVLKSLQRLVNPSYQDQMASPLPQEISVNSTP 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g3308 947 MobiDBLite consensus disorder prediction 362 437 - -
Alju03g3308 947 MobiDBLite consensus disorder prediction 18 54 - -
Alju03g3308 947 SUPERFAMILY Protein kinase-like (PK-like) 656 939 IPR011009 -
Alju03g3308 947 PRINTS Tyrosine kinase catalytic domain signature 826 836 IPR001245 GO:0004672|GO:0006468
Alju03g3308 947 PRINTS Tyrosine kinase catalytic domain signature 845 867 IPR001245 GO:0004672|GO:0006468
Alju03g3308 947 PRINTS Tyrosine kinase catalytic domain signature 779 797 IPR001245 GO:0004672|GO:0006468
Alju03g3308 947 PRINTS Tyrosine kinase catalytic domain signature 889 911 IPR001245 GO:0004672|GO:0006468
Alju03g3308 947 ProSiteProfiles Protein kinase domain profile. 666 929 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g3308 947 Gene3D Transferase(Phosphotransferase) domain 1 746 929 - -
Alju03g3308 947 CDD STKc_MAP3K-like 672 918 - -
Alju03g3308 947 Gene3D Phosphorylase Kinase; domain 1 659 743 - -
Alju03g3308 947 FunFam PAS domain-containing protein tyrosine kinase family protein 744 935 - -
Alju03g3308 947 MobiDBLite consensus disorder prediction 1 86 - -
Alju03g3308 947 Pfam Ethylene-responsive protein kinase Le-CTR1 139 337 - -
Alju03g3308 947 FunFam Serine/threonine-protein kinase isoform 1 657 744 - -
Alju03g3308 947 MobiDBLite consensus disorder prediction 538 556 - -
Alju03g3308 947 SMART serkin_6 666 924 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g3308 947 MobiDBLite consensus disorder prediction 55 73 - -
Alju03g3308 947 Pfam Protein tyrosine and serine/threonine kinase 667 916 IPR001245 GO:0004672|GO:0006468
Alju03g3308 947 ProSitePatterns Protein kinases ATP-binding region signature. 672 694 IPR017441 GO:0005524
Alju03g3308 947 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 59 927 - -
Alju03g3308 947 MobiDBLite consensus disorder prediction 362 434 - -
Alju03g3308 947 MobiDBLite consensus disorder prediction 532 556 - -
Alju03g3308 947 ProSitePatterns Serine/Threonine protein kinases active-site signature. 785 797 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g3308 Alju-ChrAlju03 57103989 57111734 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g3308 1 902 MAP Kinase Kinase Kinase AT1G08720 54.846 0.0 927
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Alju03g3308 PK_Tyr_Ser-Thr 3.1e-61 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju03g3308 03 57103989 57111734 Alju01g1665 01 13342221 13343808 CCT
Alju03g3308 03 57103989 57111734 Alju03g3308 03 57103989 57111734 ECH