Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g3267 ATGGCTTTCTTTCAAGCCACTCTTACTTCCTTACCACTTCTACGTTCTACATCATATCTCAACACCAGCACCGTTATCACTCTCTGCGTATTCTTCGCCCTTCTCTGCGCTTGCATCGTTATCGGTCACCTTCTCGAAGAGCGCCGGTGGGCCAATGAATCCATCACTGCCCTCTTTCTGGGGCTGTGTTCTGGAGTGGTGGTCTTGCTGGTGACCAAGTTTAGTAATACTGAACTTTTGAAATTCAGCGAAAACTTGTTCTTTCTTTACTTGCTTCCTCCTATCATTTTTAATGCTGGTTTCCAAGTGAAGAAGAAGCACTTTTTCAAGAATTTTACAACTATTCTGCTGTTTGGAGTAATTGGAACTGTTGTTTCATTCTGCTTCATATCGTTTGGTGCCTTTTTTCTGCTCAGGAAGATAGGTCTAATCTTGAAGATGCAAGATTACCTAGCCATTGGTGCCATATTCTCAGCAACTGATTCAGTTTGTACATTGCAGGTTCTCAGTCAAGATGAAACGCCCCTCCTATACAGCATTGTATTTGGGGAGGGAGTTGTGAATGATGCAACCTCTATTGTACTTTATAATTCAGTCCAGTCCCTTGACTTCAGCAGCATCAGTGCTACTACAGCCCTGAACTTGTTGGGGACATTCCTTTACCTCTTCCTCACTAGCACTGTCCTTGGTATATCAGTTGGCCTTTTGAGTGCTTTTACTATTAAAACACTTTACTTTGGAAGGCATTCTACTGATCGTGAAGTTGCACTCATGATGCTTATGGCTTATTTATCATACATGATTGCCGAGCTTTTGAGTCTCAGTGGGATTTTGACAATTTTCTTTTGTGGCATTGTCATGTCACATTACACGTGGCACAACGTTACAGAAAGCTCAAGGATAACTACCAAGCATGCTTTTGCAACTATCTCGTTCATTGCAGAAACTTTTATATTTGTATATGTCGGCATGGATGCTTTGGATATCGAAAAATGGAAAACCAGCTACGCAAGCGTAGGGACTTCAATTGCTATCAGTTCAACTTTATTGGCGTTAGTATTGGTTGGTAGGGCGGCTTTTGTGTTTCCTATTTCAAACATTAAAAACTGGATCAAGACACAAGAGAGTTCCAAATTCGAGTTCAGATCACAGTTTATAATATGGTGGGCAGGCCTATTGAGAGGTGCAGTGACTATTGCCTTGTGTTATTACCAGTTTGGAAGAGAGAGAGATTCAACTCAAGAAGGTGCAGCGGTGATCACCTCCACCATAATCGTCGTACTATTCAGTACTGTGGTGTTTGGTTCCATAACAAAGCCCTTGATTCAGGCGGTGCTGCTGAGGCATTCAAAACCACCGATTTCTGAATCTAATGAAATGGCGGAGGATTTTAGATTCTTGCTCCTTGAAAGTGGTGGTCCCAGTGACCAGGGCAACAATCAGCCAGTCAGCAGGAGAAGCAGCCTAAGTTTACTGATAAGTCATCCGACGTCAACAGTTCACTACTATTGGAGGAAGTTTGACGATAAATATATGAGACCAATATTTGGCGGGAGTGGTTTTGTTCCCTTTGTTCCTGTTTCACCTTCTGAATCTAATGACGCAGCTCCTGCTCCAGACAATTAG 1626 0.425 MAFFQATLTSLPLLRSTSYLNTSTVITLCVFFALLCACIVIGHLLEERRWANESITALFLGLCSGVVVLLVTKFSNTELLKFSENLFFLYLLPPIIFNAGFQVKKKHFFKNFTTILLFGVIGTVVSFCFISFGAFFLLRKIGLILKMQDYLAIGAIFSATDSVCTLQVLSQDETPLLYSIVFGEGVVNDATSIVLYNSVQSLDFSSISATTALNLLGTFLYLFLTSTVLGISVGLLSAFTIKTLYFGRHSTDREVALMMLMAYLSYMIAELLSLSGILTIFFCGIVMSHYTWHNVTESSRITTKHAFATISFIAETFIFVYVGMDALDIEKWKTSYASVGTSIAISSTLLALVLVGRAAFVFPISNIKNWIKTQESSKFEFRSQFIIWWAGLLRGAVTIALCYYQFGRERDSTQEGAAVITSTIIVVLFSTVVFGSITKPLIQAVLLRHSKPPISESNEMAEDFRFLLLESGGPSDQGNNQPVSRRSSLSLLISHPTSTVHYYWRKFDDKYMRPIFGGSGFVPFVPVSPSESNDAAPAPDN 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g3267 541 PRINTS Na+/H+ exchanger signature 115 123 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Alju03g3267 541 PRINTS Na+/H+ exchanger signature 86 97 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Alju03g3267 541 PRINTS Na+/H+ exchanger signature 154 164 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Alju03g3267 541 PRINTS Na+/H+ exchanger signature 100 114 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Alju03g3267 541 PANTHER SODIUM/HYDROGEN EXCHANGER 23 516 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Alju03g3267 541 Pfam Sodium/hydrogen exchanger family 29 442 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Alju03g3267 541 Gene3D - 145 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g3267 Alju-ChrAlju03 56812905 56818829 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g3267 6 533 Antiporters AT3G05030 62.082 0.0 660