Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g3263 ATGTGTCTCCCGGAAGGAGAGGGAGACAGCCAGACGTCGATGGCACTGGAAGCCGTTGTTTTCCCTCAGGAGTACCCCTTTGGCTATGGCGCTTCCAAAGACCTCTATCCTCTCTGGCCTTTTCACGACGATTTCAACCTTCCCAAACACCAAGACCACCTCAATTTCCTCCACACCCAAACAGAACCTTATGGCTTCATCGGAGACTGGTGCTCTTCTTCTGCGCCGTCCTCCGCGTTGCCCCACTCCGGCGAACTTGTACATGTACAGAATCATCACGCCACCTCTGACACTAGTAACAACCCGACACCCTCGTCTGAAGCATCCCATTCTCGTCCCAAGAGACGCAGGGCCAGGACCCGCAAGAACAAGCAGGAGATCGAGAACCAGAGAATGACTCACATTGCCGTGGAGCGCAATCGAAGAAAGCAGATGAACGACTATCTCTCTGTTCTTCGCTCTCTCATGCCCGACTCCTACGTCCAAAGGGGAGATCAGGCTTCCATAATCGGAGGGGCTATTAACTTTGTGAAGGAGCTGGAGCAGAGGCTTCAATTTATGGGGGGCCAGAAAGTAACAGGGGCCAAATCTCAGAGCATGCCCTTCTCCGAGTTCTTCACGTTTCCTCAGTATTCGACGAGCTGCAGCGGCGAGTGTTCGGCGGGCAAAGTGGGGGAGGTATCGTCGGAGGCGAGTATCGCAGATATAGAAGTGACGATGGTGGAGAGCCATGCGAATCTGAAAATAAGGACGAGGAAGAGGCCGAAGCAGCTGTTGAAGATGGTGTCTGCGTTGTACAGCATGCGTCTCACGATCTTGCATCTTAATGTGACGACCACCGCCGATATTGTGCTCTACTGCATCAGCGTCAAGTTAGAAGAAGAGTGCAAGGTGGGATCAGTGGAGGAGATAGCAGGGGCAGTGCACAAAACGTTGGAGAGGATCGAACAAGAGAGTGCGCAGAATCAAGATGCCAACACCAGCTAG 987 0.5309 MCLPEGEGDSQTSMALEAVVFPQEYPFGYGASKDLYPLWPFHDDFNLPKHQDHLNFLHTQTEPYGFIGDWCSSSAPSSALPHSGELVHVQNHHATSDTSNNPTPSSEASHSRPKRRRARTRKNKQEIENQRMTHIAVERNRRKQMNDYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQRLQFMGGQKVTGAKSQSMPFSEFFTFPQYSTSCSGECSAGKVGEVSSEASIADIEVTMVESHANLKIRTRKRPKQLLKMVSALYSMRLTILHLNVTTTADIVLYCISVKLEEECKVGSVEEIAGAVHKTLERIEQESAQNQDANTS 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g3263 328 PANTHER MAX DIMERIZATION, MAD 75 319 - -
Alju03g3263 328 Gene3D - 114 192 IPR036638 GO:0046983
Alju03g3263 328 MobiDBLite consensus disorder prediction 91 131 - -
Alju03g3263 328 Pfam Helix-loop-helix DNA-binding domain 130 181 IPR011598 GO:0046983
Alju03g3263 328 SMART finulus 135 186 IPR011598 GO:0046983
Alju03g3263 328 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 129 192 IPR036638 GO:0046983
Alju03g3263 328 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 129 180 IPR011598 GO:0046983
Alju03g3263 328 MobiDBLite consensus disorder prediction 91 108 - -
Alju03g3263 328 ProSiteProfiles ACT domain profile. 246 326 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g3263 Alju-ChrAlju03 56785505 56786682 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g3263 14 292 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 48.684 1.90e-73 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju03g3263 HLH 2.3e-10 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju03g3263 03 56785505 56786682 Alju03g3263 03 56785505 56786682 CCT
Alju03g3263 03 56785505 56786682 Alju03g3263 03 56785505 56786682 ECH