Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g3262 ATGGAGAGGGGGCCCCACCCTCTCTCTAGTCTGCTCCGTCCGTCCATACATTCCGATTCTGTGACTGTGAGAGGGCCATATATAAAGCCCAACACCACTTCTCACTGTCTCTCCACCTTCTTCTCTTCAACCACCGTCGTCATCATGCCTCCCCTCCTCTTCCTCCTCCTCCTCCTCCTCCTCCTTCCTCCTCCATTCCCTCTGGTCTGCGCCCAGGTCGGCAACACCGGTCCCACCGGCTCTTACTACAACTCCTACACCCCCTCCCTCGCCATCATCATCGTCATTTTAGTCGCCGCCCTCTTCCTCGCCGGCGTCTTCTCCATCTATATCCGCCACTGCGGCCGATCCTCCAGCACCCCCGTCCCCAACCTCACCGCTCGCCCCAGACGTCAGCCTCGGGGCCTTGATGCCGCCGTCATCAACTCTTTCCCCACTCTTGACTACTCCGCTGTCAAGATTCACAAGATTGGAAAAGTTGTCCTGGAATGCGCCGTCTGCTTGAACGAGTTCGACGACTCCGAAACACTCCGTCTCATCCCCAAGTGCGACCACGTCTTCCATCCCGACTGCATTGACGAGTGGTTGGCCTCCCACACCACCTGCCCCGTTTGCAGAGCCGACCTCACCCCTCAGCCCGCCGACTCCGTTCATCCACTTCCTGTGCCTGACTCTCACGCTGATATCGAATCACAAAATGACGCTCCGGAACGTGAAGCCGCCCAGCCTGACGTCACGGGTTTCAATCAGAAGCTGAATCAAAGCCGTACGCGGGGTTCTCGGTCGAGTCAGACGGTATGGTGGGCGAGGTCTCACTCCACGGGGCACTCGCTGCTCCAGCCGGGGGAAAACACCGACAGGTACACTCTGAGACTGCCGGCTGACGTCAGGAATCAGCTGCTAAATCAGAAATTTCATAGGGCCACAAGCTTGGTAGTATTGCCCAGGGAGAGTAGTTCGAGGAGTGGGTATCGAACCGGAGGTGAGGGTAGTGGCGGGGGAAGGTTTTCGAGGCGACTGAGCCGCGGCTTCAAATCAGACCGATGGGTCTTCACGATGGCGCCGCCCTTCTTAGTGAGGGCGTCGTCGCTCAGGTCTCCGAAGGTTGCAAGTAACAGTGCCGCCGTTGAAGAGACCTCCTCCTTCCCTATCATGCCACCATCGGCGGGGGACTAG 1176 0.5867 MERGPHPLSSLLRPSIHSDSVTVRGPYIKPNTTSHCLSTFFSSTTVVIMPPLLFLLLLLLLLPPPFPLVCAQVGNTGPTGSYYNSYTPSLAIIIVILVAALFLAGVFSIYIRHCGRSSSTPVPNLTARPRRQPRGLDAAVINSFPTLDYSAVKIHKIGKVVLECAVCLNEFDDSETLRLIPKCDHVFHPDCIDEWLASHTTCPVCRADLTPQPADSVHPLPVPDSHADIESQNDAPEREAAQPDVTGFNQKLNQSRTRGSRSSQTVWWARSHSTGHSLLQPGENTDRYTLRLPADVRNQLLNQKFHRATSLVVLPRESSSRSGYRTGGEGSGGGRFSRRLSRGFKSDRWVFTMAPPFLVRASSLRSPKVASNSAAVEETSSFPIMPPSAGD 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g3262 391 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 125 212 IPR013083 -
Alju03g3262 391 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 84 233 - -
Alju03g3262 391 SMART ring_2 164 205 IPR001841 -
Alju03g3262 391 SUPERFAMILY RING/U-box 158 212 - -
Alju03g3262 391 MobiDBLite consensus disorder prediction 246 266 - -
Alju03g3262 391 CDD RING-H2_EL5-like 163 206 - -
Alju03g3262 391 FunFam E3 ubiquitin-protein ligase ATL6 124 212 - -
Alju03g3262 391 Pfam Ring finger domain 163 206 IPR001841 -
Alju03g3262 391 MobiDBLite consensus disorder prediction 318 338 - -
Alju03g3262 391 MobiDBLite consensus disorder prediction 215 266 - -
Alju03g3262 391 ProSiteProfiles Zinc finger RING-type profile. 164 206 IPR001841 -
Alju03g3262 391 MobiDBLite consensus disorder prediction 370 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g3262 Alju-ChrAlju03 56767438 56768613 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g3262 51 361 Rapid Response to Elicitors AT3G05200 44.785 5.01e-74 234