Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g3242 ATGGACGAATTAACTATGGAAATACTTGCTGAGAAGTTTAATCAATTTGTGATTGACTGCAATTTGAAGTCATCTAATCGCGTTTCAGGCAATATTTCACCACAAGTGAAAGAGCATTCTGGCTGCATGGATGACAATAGTCTGTCCAATGGGACGAATGAAATTTCTCCACATCAGGGTCACACACTTCCAATATTGAAGAAAATACTTGATTTGAGTTCCAAAATTCAGGAGTTGAAGAACCAACATGTAGCCCTATCTGATCATGTGAAACTCACAACTGGTTCCTTTCCAGGCCTTGAAGTAGTAAATTCTGTTCAGAATCTGGGCACTGAGTACGAACTACTGAAAAGAAAGTACCTTGAGGAGTTCGCAGAGCGGAGACGGCTTTACAATGAAGTGATTGAAATGAAGGGAAACATCCGAGTTTTCTGCAGATGCAGACCTCTAAATGAAATTGAAACTGCTAATGGACATGCATCTGTCATCAACTTTGAATCATCTACCGACAATGAGCTTCAAGTCATTTGCTCTGATTCTTCTAAAAAGCAATTTAGATTTGACTGTGTCTTTCGACCTGATGATAATCAAGAGGCTGTTTTTGCACAAACAAAACCTATTGTTACATCAGTGTTGGATGGGTTGGAGATTAAGCAAGCAGCAGATGGAACCCAAGAAGTTCCCGGACTAGTTGAAGCTCGTGTTTATGGAATAGAGGACGTGTGGGAAATGCTCAAGTCTGGAAACAGGACCAGATCTGTTGGCTCAACCAATGCTAATGAGCTTAGCAGTCGTTCTCATTGCTTGTTACGAGTTACTGTTGTGGGGGAGAATCTTATCAATGGCCAGAGAACAAGAAGTCACCTCTGGCTAGTAGACTTAGCAGGGAGCGAACGTGTGGGAAAAACTGAAGCTGAAGGAGATAGATTGAAGGAATCTCAATTTATAAATAAGTCTCTATCAGCACTCGGTGATGTTATTTCTGCACTTGCATCCAAATCAGCTCACATCCCTTACAGGAACTCAAAACTCACACATATACTGCAGAGCTCACTAGGAGGGGATTGCAAAACTCTGATGTTTGTCCAGATAAGTCCAAGTGCGGCAGACCTAGGAGAGACACTTTGTTCACTGAATTTTGCCACCCGTGTCCGAGGAATTGAAAGTGGCCCAGCTCGCAAGCAAGTGGACCTAACTGAGCTGTTTAAGTACAAGCAGATGGCAGAAAAGCTTAAGCACGATGAGAAGGAAACAAAGAAATTACAGGATAGCCTGCATGCCTTACAACTAAGGCTTGCTGCCAGAGAACATGTGTGCAGGAATCTTCAGGAAAAGGTTCGGGACCTTGAGAACCAGATAGCAGAGGAGAGAAAAACCAGATTGAAGCAAGAAAGCAGAGCGACCGCAATTTCAGCTCAACCCTCAAGACTCGCATCGCTGAAAGAAGCACCAACTCGGAAACCTCTAGCAGAGAAAAAGCCGCCACTGAATCCTTCGAAGTTGAGGATGCCACTGCGGAGGATTACGACAAACATCTTGCCCCAACCATCTCCTATGCCCCCAAAGAAAAATGGAAAGGAGAACACTGCCAGAAAGAGCATAATGATGAGAAACGCAGAAGACCTTGTGAAGCCGAGACGGGCGTCCATTGCTGTGAGACCACAGGCGGCGGCACCATCAACAAGTCAAGTTTTTCAGCCCAGGAGGCGGGTCTCAATCTCTACATTCCGCGCTGATACTAGTTCTGACTTGAGAACTCCACTTCGTGGCTCTTCCTGTGGATTCACCAGTGGTCAGCCCTCATCGATAAGAAGCCAGAGGAAAGCTCGGTATTCAAGGCTGTTTGCTCCTTTGCCAGAAATGAGAGCATCAGTTGAGACAACACCAAGTATCATGAGGAGCAGTAGCAAGTTCATGAGCAGTCCCATAGGGGCGGTTAGAAATCCCGCTGTGGTTGCTCTGCAACGAAAATCTTTTGTGTGGAGTCCTCTGAAGCTGAGAAGCTTGAGAAATAATAGAAAGTCATCACTGTTGCCATCTCGGCCTTCCTCTGAAATGCAATGA 2064 0.4486 MDELTMEILAEKFNQFVIDCNLKSSNRVSGNISPQVKEHSGCMDDNSLSNGTNEISPHQGHTLPILKKILDLSSKIQELKNQHVALSDHVKLTTGSFPGLEVVNSVQNLGTEYELLKRKYLEEFAERRRLYNEVIEMKGNIRVFCRCRPLNEIETANGHASVINFESSTDNELQVICSDSSKKQFRFDCVFRPDDNQEAVFAQTKPIVTSVLDGLEIKQAADGTQEVPGLVEARVYGIEDVWEMLKSGNRTRSVGSTNANELSSRSHCLLRVTVVGENLINGQRTRSHLWLVDLAGSERVGKTEAEGDRLKESQFINKSLSALGDVISALASKSAHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSAADLGETLCSLNFATRVRGIESGPARKQVDLTELFKYKQMAEKLKHDEKETKKLQDSLHALQLRLAAREHVCRNLQEKVRDLENQIAEERKTRLKQESRATAISAQPSRLASLKEAPTRKPLAEKKPPLNPSKLRMPLRRITTNILPQPSPMPPKKNGKENTARKSIMMRNAEDLVKPRRASIAVRPQAAAPSTSQVFQPRRRVSISTFRADTSSDLRTPLRGSSCGFTSGQPSSIRSQRKARYSRLFAPLPEMRASVETTPSIMRSSSKFMSSPIGAVRNPAVVALQRKSFVWSPLKLRSLRNNRKSSLLPSRPSSEMQ 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g3242 687 PRINTS Kinesin heavy chain signature 288 306 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Alju03g3242 687 PRINTS Kinesin heavy chain signature 337 358 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Alju03g3242 687 PRINTS Kinesin heavy chain signature 257 274 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Alju03g3242 687 Gene3D Kinesin motor domain 91 215 IPR036961 -
Alju03g3242 687 ProSiteProfiles Kinesin motor domain profile. 212 387 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Alju03g3242 687 Gene3D Kinesin motor domain 216 429 IPR036961 -
Alju03g3242 687 MobiDBLite consensus disorder prediction 460 501 - -
Alju03g3242 687 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 140 422 IPR027417 -
Alju03g3242 687 MobiDBLite consensus disorder prediction 582 608 - -
Alju03g3242 687 ProSitePatterns Kinesin motor domain signature. 287 298 IPR019821 GO:0003777|GO:0005524|GO:0007018
Alju03g3242 687 Pfam Kinesin motor domain 216 387 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Alju03g3242 687 Coils Coil 404 466 - -
Alju03g3242 687 SMART kinesin_4 138 395 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Alju03g3242 687 ProSiteProfiles Kinesin motor domain profile. 140 204 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Alju03g3242 687 PANTHER KINESIN-LIKE PROTEIN KLP-3 216 521 IPR027640 GO:0003777|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g3242 Alju-ChrAlju03 56643758 56647813 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g3242 215 412 Calmodulin-binding Proteins AT5G65930 45.960 4.50e-41 159