Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g3240 ATGCAATTAAATTGCTTAAATTCATTGCAAAATACGGCTTTTCATCGTTATTTTACGCATATGAGATCCCGACCCCTTTTCCCTCCGCGGACACCCCCTCTGTTTTTGGCCGACGCAATATATGGTTCCTCACTACTCTCTCTCAAGACAACACAGACACCAATGCAAATGCAAGACATTTTTGGATCAGTTCGCCGATCACTGGTGTTTCGTGCTACGCCGGAGAACGAAGAAGCCTCACTTGGAGGAACCCTAGTTGAAAAGATCAATTCTTGCATTCGCAAGTCCAGAGTCTTCTCTAAACCTTCTCCCACGTCTCCGCCAATGCCACCCGTCACAAAGGAATCTTCACCGATGATCCGATGGCGCAAGGGCGAGTTGATCGGATGCGGTGCCTTTGGCCGAGTTTACATGGGCATGAATCTTGATTCTGGAGAGCTTCTAGCAGTAAAACAGGTTCTGATCGCGTCTAGCAGTGCTTCGAAGGAGAAGGCACAGGCTCACATAAAGGAGCTTGAGGAAGAAGTTAAGCTTCTTAAATATCTTTCTCATCCCAATATTGTTAGATATTTGGGTACAGTTAGGGAGGAGGACACCTTAAATATTCTTCTGGAGTTTGTACCAGGTGGATCCATATCATCACTTTTGGGGAAGTTTGGAGCTTTCCCTGAGGCTGTTATTAGAACTTTCACGAAACAGTTACTGCTGGGACTCGAGTACTTGCACAAAAATGGAATCATGCACAGGGACATTAAGGGGGCAAATATCCTTGTTGATAATAAAGGGTGCATAAAACTTGCAGATTTTGGGGCATCCAAACAGGTCGTTGAGCTGGCTACCATTTCTGGTGCCAAGTCTATGAAGGGTACTCCATATTGGATGGCTCCTGAAGTTATTCTCCAGACTGGGCATAGTTTCTCGGCTGATATATGGAGCGTTGGCTGTACTGTGATTGAAATGGCCACTGGAAAACCTCCCTGGAGCCAGCAGTATCAAGAGGTTGCCGCTCTCTTCCACATAGGAACAACAAAGTCGCATCCACCAATTCCGGATCATCTCTCTGTTGGAGCAAAAGATTTTCTATTAAAATGTTTGCAGAAGGAACCAGTGTTAAGGCCATCAGCATCAGAACTGCTGCAGCATCCTTTTGTCACTGGTGAACAATTGGGTTCATTTCCTGGGTCATATACCGCAACGGGAAAATTTGAAGCTTCTTCAGCATCTTGTGCCTCAAACATCGAAACTACCTCAACTGTACATCCTGAGGAAGAAAATAAAGACTATTGGGGAATGGGCAATGATGACGACATGTGTGAGATTGATGGCAAAGATGAGTTCTCTGAGGGGGCTGTTAGATTTAGATCCTCGATGTCAGAAAATATTATGAGTTTCAACCCAATGTCTGATCCCTCTGATGATTGGAGTTGCAAATTTGTTGCGAGTTCAGAACTGGATCGTAGTGGAGTTAGTATTACCACTGACGAAATGTTCAAGCCTTCTGACCACCTGGAGGCTTCCCATGAGGAACACACAGATTTTTCCTTCTCAGGTGAACCGTCAGTGTCTGAGGATGATGATGAGCTCACGGAGTCAAAAATACAAGCTTTTTTGGATGAGAAGGCTCTAGGACTGAAAAAACTGCAGACACCTTTATATGAAGAGTTCTACAACAGTTTAAATACATCTTGTTCTCCCAATGTGGTTGAAAACGCAAATGACGAAACTACTCCAAAGTTCTTGAAATTACCTCCGAAAAGCAGGTCCCCGAGTCGGGCACCAATTGGCACCCCATCAAAAGCAGTTGACCATACCGAAAGTCCTGAAAGTACTGGCAGGTCCTCCCCAAATGTAGGGAATGCACCTGATCATAATTCACAGAACATACCATCACCGCCCCTTGATGAATGGAAAGGATTGCTAGTTGATTCCCAGCAGGAGCCTTCTAGCCCAAGTTTAAGCTTTTCTGAGAGACAGAGGAAGTGGAAAGAAGAACTTGATCAGGAACTCGAGAGAAAGCGCGAAATGATGCGTCAAGCTGGCATAGGCGGGAAAACATCATCACCAAAGGATCGAGCCTTAAACCGGCAGAGAGAACGGACAAGATTTGCATCACCCAACAAATGA 2124 0.4515 MQLNCLNSLQNTAFHRYFTHMRSRPLFPPRTPPLFLADAIYGSSLLSLKTTQTPMQMQDIFGSVRRSLVFRATPENEEASLGGTLVEKINSCIRKSRVFSKPSPTSPPMPPVTKESSPMIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIASSSASKEKAQAHIKELEEEVKLLKYLSHPNIVRYLGTVREEDTLNILLEFVPGGSISSLLGKFGAFPEAVIRTFTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKQVVELATISGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPDHLSVGAKDFLLKCLQKEPVLRPSASELLQHPFVTGEQLGSFPGSYTATGKFEASSASCASNIETTSTVHPEEENKDYWGMGNDDDMCEIDGKDEFSEGAVRFRSSMSENIMSFNPMSDPSDDWSCKFVASSELDRSGVSITTDEMFKPSDHLEASHEEHTDFSFSGEPSVSEDDDELTESKIQAFLDEKALGLKKLQTPLYEEFYNSLNTSCSPNVVENANDETTPKFLKLPPKSRSPSRAPIGTPSKAVDHTESPESTGRSSPNVGNAPDHNSQNIPSPPLDEWKGLLVDSQQEPSSPSLSFSERQRKWKEELDQELERKREMMRQAGIGGKTSSPKDRALNRQRERTRFASPNK 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g3240 707 ProSiteProfiles Protein kinase domain profile. 122 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g3240 707 FunFam Mitogen-activated protein kinase kinase kinase 2 121 414 - -
Alju03g3240 707 Gene3D Transferase(Phosphotransferase) domain 1 121 417 - -
Alju03g3240 707 FunFam Serine/threonine-protein kinase STE11 118 212 - -
Alju03g3240 707 Coils Coil 658 678 - -
Alju03g3240 707 Pfam Protein kinase domain 123 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g3240 707 MobiDBLite consensus disorder prediction 503 529 - -
Alju03g3240 707 SUPERFAMILY Protein kinase-like (PK-like) 121 385 IPR011009 -
Alju03g3240 707 MobiDBLite consensus disorder prediction 562 707 - -
Alju03g3240 707 ProSitePatterns Serine/Threonine protein kinases active-site signature. 246 258 IPR008271 GO:0004672|GO:0006468
Alju03g3240 707 MobiDBLite consensus disorder prediction 690 707 - -
Alju03g3240 707 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 98 392 - -
Alju03g3240 707 SMART serkin_6 122 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g3240 707 Coils Coil 155 182 - -
Alju03g3240 707 MobiDBLite consensus disorder prediction 656 678 - -
Alju03g3240 707 CDD STKc_MAPKKK 121 384 - -
Alju03g3240 707 ProSitePatterns Protein kinases ATP-binding region signature. 128 151 IPR017441 GO:0005524
Alju03g3240 707 MobiDBLite consensus disorder prediction 602 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g3240 Alju-ChrAlju03 56633416 56640411 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g3240 57 707 MAP Kinase Kinase Kinase AT1G54960 57.326 0.0 701
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Alju03g3240 Pkinase 1.1e-70 CL0016