Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g3231 ATGATCTACGCCGTTCACATAACTTACAAAAAGACGTGTAGGGTGGATCATAACCCAATACAAATCGTATTCTCCCTCCTCGACGATCTTCATCCTTCCCACACAGCGTTTAAACAAACAAAAATATTTCATTGGCCTGTAGGCCTTTTTATTCAAGTTTCGCGGCAACAATTGTTTTTTTTTCTTTTTTTCTTTTTTTATTTTTCCTCATTCACCCCTTCCGCTGTATCTCTCAGAATTCTTTCCCCACCCTTCTTTCTTGTTTCTCCCTTGCTTCAACGGGATTCGGTTAAACCCGATAAACGTCATCTGATTCTAGAGCATGCTTTATTTTTCACCGTTCAGATGTATATTCTAGTTATGTATCATGTAAATAAAGGATTGATGGCACCAACAAGGAAATCAAGAAGTGTGAATAAACGGTTTTCAGGTTTAAATGAGGCCTCTCCTGATAAGGATGGAGTTAACTCAAATAAAAATAAGAATCGGAAGAAAAAGTTGTCTGACAAATTGGGATCTCAATGGAGCAAGGAGGAACTAGAGCGTTTTTATGAAGCATACAGGAAGCATGGGAAAGATTGGAAGAAGGTATCTACTGCTGTACGGAACAGATCCACTGAAATGGTGGAGGCTCTTTATAATATGAATAGGGCGTATTTATCTCTTCCTGAGGGGACAGCTTCTGTTGTTGGTCTCATAGCAATGATGACAGATCATTATAATGTGCTGGAAGGGAGTGATAGTGATAAGGAGAGCAGTGATGCACCTGAATCTCAAAAACATTTGAAACGGAAGCGTGGGAAAGTTCAGCTTATTTTTTCTAAAGATTCTGTTCAAAGTCATTCGGTTGCTACTAACGATGGTTGTCTCTCTTTATTGAAGAAAAGACACTTTGATGGTAGCCAGCCTCGTGCAGTTGGAAAACGAACACCTCGCGTCCCAGTTTCCCACTCTCATAAAAAATTTGATCGGGAGAATTTTGTTTCACCAATTAAAAGAAGCCTGAAGTCAGAGAGTAATGCTAATGATGATGAAGTTGCTCATGTTGCAGCTCTGGCTTTAACTGAGGCCGCACAAAGAGGAGGCTCTCCTCATATTTCTCAAACTCAGTACAGAAGAGCAGAGCAGAAATCCTCTCCTGTTCAAAGCTGGGAAAAAATGTCAAAGACAGCTCGTTCCAAGTTTCATGGTGCATCTGCGGGTGAAGAGTGCTTGGAAGGTAGTGTAGAAAGTGGGGAGGCTGAAAATGGAGAATATGCTAGAGATACTAGTCCATTGATGGACATGGAAGGTTTTGGCACGGTTGAAGTACAACAGAAGGGGAAGAAAATTTATAGAAAGAAAGAGAGAGCAGAAAATGTTCGAAGTTATCAGCTTGATGATGGTGGGGAGGCATGTAGTGGCACTGAAGAAGGACTTTATTTTAATTCGTTGAAGGAAAAGGTTGATAGTGAGGTTACTAATGCCAAATCTAAGCAATTCTATCCTCAAGGTCGGAAGAAACGAAGCAAAAAACTTTTCTTTGGAGATGAAAGCTCTGCCTTGGATGCTTTACAAACTTTGGCTGATCTGTCTTTAATGATGCCTGTGTCTACAATGAATTCTGAGTCATCAGTCCAGTTGAAGGAAGAAAGAATGACTGTTGATAAAGATGACAAGTCTGCTTTGCCTGAATCTACGTTTACAAGTCAAAACAGAGATAAACTTAAAATCCAAGGTTCAAAACAAAAGTTACTTCATGCAGTTCCTGGAATTGAGGCTTCAAACTCAAGAAAATCTAAACTTGGACGGGAGGTAGAAAATGAAACGAATGCCTCAGCTGAATCAAAAGAACATATAACTCCTGATAGAACATGGAAAAGAAAGCGCAAGTCTCTGGTCTCAAAGGCTGTATCTGATGAAGAGAATAAACCAATGATTAAAGGAAAACATAGTGGTCAGATTTTTGCTCTCCCCAAACAAGTGAAACCAGTCAAATCATCTGAGAGCTCCTTGGGCGGTGATCCAAAAGACTTGACAGCATCAACTGCAGAAATTCCACTAGCAAGTGAAGTTAGTTTACTAAATAAAAAAAGTAGACGTAAGATGAGTCTACAGAAGACATTCAATATGAAAGAGAAATCTTCTGAGAACATGTTGAAAAAGCAACCTAGTAAGTATTCTTCTGGTCTTCAAGACAGGGCTTCATATTTAAAGGGAAAGCTTTCTGGTTGCTTGTCATCATGCATGGTTCGCAGGTGGTGTACTTTTGAGTGGTTTTATAGTGCTATTGATTATCCATGGTTTGCCAAAAGGGAATTCGTGGAGTACTTAAACCATGTTGGTCTAGGGAATATCCCAAGGCTAACTCATGTTGAGTGGAGCGTTATAAAAAGTTCCCTGGGGAAACCTCGCAGGTTTTCTGAGCACTTTCTTCGTGAAGAAAGACAAAAGCTTGAACAGTATAGGGAATCTGTGAGGAAACATTACACTGAACTACGCACTGGTATCAGGGATGGACTCCCAACAGATTTAGCAAGACCTTTATTTGTTGGACAACGAGTAATTTCTATTCACCCCAAATCAAGGGAGGTTCATGATGGGAGTGTTCTTACTGTTGATCATGACAAATGCAGGGTTCAGTTTGACCGTCCTGAACTAGGGGTTGAATTTGTCATGGATATTGATTGCATGCCTATGAATCCCGTGGATAATATGCCAGAAGCTCTGAGAAGACAGATTGGTGCTGGCAGAGTTTCTTACGTGGGCAAACAGCTTCAGATAAATGAAATTTCTAATGTTGAGGGTGGGGTGACATGTGGTTCAGGTGGACCCCTGGAGAAGCTACCCGCCCCTTCAAGTACTTTGGTAAAGGAGGATGTTAATCATGCTGTTGCCCAATCAAAGGTTGGAACCATTGATAACGTTGATACACTACAAGAAGCATATGCTCAGCCGCATCATCAAGCTAGAGAAGCTGATATACACGCCCTTTCTGAACTGACTCATGCTCTAGATAAAAAGGAAAAATTGTTAATGGAGCTTAGAAATGCAAATAATGACATATTGGAAAACCAAAATGACGTAGACTACTTTAAAGATTCAGAGTCTTTCAAGAAGCATTACGCCACGGTACTTGTACAGCTAAAGGAAGCCAGTGGGCAGGTTTCTTCTGCCCTGCTTAATTTGAGGCAACGAAATACTTACACGGGAAACTCTCCATCACCATGGGTGAAGGCCCCAGCAAGTTTCAGTGTTCAAGACGATCTTCCATGTGCACTAGATAGTTCCCTAACGCAAGGGTTAGCATCAAGTGTTATTGAAATTATCAAAGGATCCTGGCTAAGAGCACATGCCATGGTAGATGCTGCAATTCAGACATTGTCTTCAACAAAAGAAGGTGAAGATGCTTTCATTAAGATAGGGCAAGCATTGGATTCCATTGACTATCAGGAGTTGGCCTCCAACTCTAAAGTGAATGGCACTTTTGGTCACCATGATCAGTCAATTTGCTGCGCATCAGAAACTCTACAGAGTGATACATCAGGTCCGAAATTGCTGAATGATTCCCACAAAGTTGATATTCAAATTCCTTCTGGGCTCATTACATCCTGTGTTGCTACTTTGATCATGATTCAGACTTGTACTGAACGGCAATACCCACCAGCTGATGTTGCTCAGATATTAGATTCGGCCGTTAACAGCCTGCATCCTTGCTGTCCTCAAAATCTTCCTATATACAGGGAAATTAAGATGTGCATGGGACGAATTAAGACCCAGATTTTAGCTCTCATCCCAACTTGA 3783 0.4089 MIYAVHITYKKTCRVDHNPIQIVFSLLDDLHPSHTAFKQTKIFHWPVGLFIQVSRQQLFFFLFFFFYFSSFTPSAVSLRILSPPFFLVSPLLQRDSVKPDKRHLILEHALFFTVQMYILVMYHVNKGLMAPTRKSRSVNKRFSGLNEASPDKDGVNSNKNKNRKKKLSDKLGSQWSKEELERFYEAYRKHGKDWKKVSTAVRNRSTEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVLEGSDSDKESSDAPESQKHLKRKRGKVQLIFSKDSVQSHSVATNDGCLSLLKKRHFDGSQPRAVGKRTPRVPVSHSHKKFDRENFVSPIKRSLKSESNANDDEVAHVAALALTEAAQRGGSPHISQTQYRRAEQKSSPVQSWEKMSKTARSKFHGASAGEECLEGSVESGEAENGEYARDTSPLMDMEGFGTVEVQQKGKKIYRKKERAENVRSYQLDDGGEACSGTEEGLYFNSLKEKVDSEVTNAKSKQFYPQGRKKRSKKLFFGDESSALDALQTLADLSLMMPVSTMNSESSVQLKEERMTVDKDDKSALPESTFTSQNRDKLKIQGSKQKLLHAVPGIEASNSRKSKLGREVENETNASAESKEHITPDRTWKRKRKSLVSKAVSDEENKPMIKGKHSGQIFALPKQVKPVKSSESSLGGDPKDLTASTAEIPLASEVSLLNKKSRRKMSLQKTFNMKEKSSENMLKKQPSKYSSGLQDRASYLKGKLSGCLSSCMVRRWCTFEWFYSAIDYPWFAKREFVEYLNHVGLGNIPRLTHVEWSVIKSSLGKPRRFSEHFLREERQKLEQYRESVRKHYTELRTGIRDGLPTDLARPLFVGQRVISIHPKSREVHDGSVLTVDHDKCRVQFDRPELGVEFVMDIDCMPMNPVDNMPEALRRQIGAGRVSYVGKQLQINEISNVEGGVTCGSGGPLEKLPAPSSTLVKEDVNHAVAQSKVGTIDNVDTLQEAYAQPHHQAREADIHALSELTHALDKKEKLLMELRNANNDILENQNDVDYFKDSESFKKHYATVLVQLKEASGQVSSALLNLRQRNTYTGNSPSPWVKAPASFSVQDDLPCALDSSLTQGLASSVIEIIKGSWLRAHAMVDAAIQTLSSTKEGEDAFIKIGQALDSIDYQELASNSKVNGTFGHHDQSICCASETLQSDTSGPKLLNDSHKVDIQIPSGLITSCVATLIMIQTCTERQYPPADVAQILDSAVNSLHPCCPQNLPIYREIKMCMGRIKTQILALIPT 1260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g3231 1260 Coils Coil 805 825 - -
Alju03g3231 1260 SMART DIRP_2 753 854 IPR033471 -
Alju03g3231 1260 ProSiteProfiles SANT domain profile. 170 207 IPR017884 -
Alju03g3231 1260 CDD SANT 175 209 IPR001005 -
Alju03g3231 1260 Pfam DIRP 752 853 IPR033471 -
Alju03g3231 1260 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 167 209 IPR017930 -
Alju03g3231 1260 Pfam Myb-like DNA-binding domain 173 210 IPR001005 -
Alju03g3231 1260 MobiDBLite consensus disorder prediction 361 388 - -
Alju03g3231 1260 SUPERFAMILY Homeodomain-like 170 218 IPR009057 -
Alju03g3231 1260 SMART sant 171 219 IPR001005 -
Alju03g3231 1260 MobiDBLite consensus disorder prediction 154 171 - -
Alju03g3231 1260 Coils Coil 991 1021 - -
Alju03g3231 1260 ProSiteProfiles Myb-like domain profile. 173 214 IPR001005 -
Alju03g3231 1260 PANTHER LIN-9 129 1260 IPR010561 GO:0006351|GO:0017053
Alju03g3231 1260 MobiDBLite consensus disorder prediction 542 556 - -
Alju03g3231 1260 MobiDBLite consensus disorder prediction 535 623 - -
Alju03g3231 1260 FunFam Protein ALWAYS EARLY 3 isoform A 131 227 - -
Alju03g3231 1260 MobiDBLite consensus disorder prediction 141 171 - -
Alju03g3231 1260 MobiDBLite consensus disorder prediction 358 426 - -
Alju03g3231 1260 Gene3D - 119 227 - -
Alju03g3231 1260 MobiDBLite consensus disorder prediction 591 623 - -
Alju03g3231 1260 MobiDBLite consensus disorder prediction 244 266 - -
Alju03g3231 1260 MobiDBLite consensus disorder prediction 244 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g3231 Alju-ChrAlju03 56564635 56573703 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Alju03g3231 DIRP 3.9e-30 No_clan