Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g3224 ATGTCCATGCCAGATAAAACTGTCTGTGAGAAGCACTATATCCAGGCAAAGAAGAGGGCAGCTAATTCTGCCATGAGAGCTAGTCTGAAGAAGGCTAAGAGAAAGTCATTAGGTGAGAGTGACATTTATCTAGAGAGCAAGAGTGAGGATTTTGACATGCCACTCGCAAGCATGAAAGTTGAACGGCATTCGGCCTCTGGAAAGAACAAGGCATCAAAAAATCAGTTTCGATATACAGCAGAGACACCAACCACAAGGACCACCTCTGGACGCAATGCCCCAAAGCTAAATCACGATTCACCAGATGATATTCCCCAGTATGAAGAAAATTGGATGTCTTATGAGTCACCACCTGCTTCTCGAATGGACTTATCCAGGAAAAGATCTCAAACAAATTTAGATGTCAATGCTGCTACAGAATACTCAGATGGAAGTACAGATTCGTCTGATGACACTGGTGGGCAAACTTGCCATCAATGTCGAAGGAATGATAGAGACAGAGTTATTTGGTGTTTAAGATGTGATAGGAGAGGATACTGTGAGAGCTGTATATTAACATGGTATTCAGACATGTCATTGGACGAAATTCAGAGGACTTGTCCTGCCTGCCGTGGCACCTGTAATTGCAAAATTTGCTTACGTGGTGATAATTCAATCAAGGTTAGGATTCGGGAGATACCTATTCTAGACAAGTTACAATATCTCCACGTGCTGCTCTCATCAGTACTTCCTGTGGTAAAGCAGATCCATCACGAGCAGTGTTATGAAGTTGAACTTGAAAAGAAGTTGCGTGGGATTGAAATAGATCTTCCCAGGACAAAACTGAATGCAGATGAGCAAATGTGCTGTAATTTCTGTCGGATACCCATTACTGATTATCACCGACACTGCCCAAATTGTACATATGATTTATGCCTTAATTGCTGTCAAGATCTTCGAGAGGCAAATGTAAATCCAGAAAAAATAACCCCAACAGACGAAGCAATACTTTCAAATCAAAATTTGCTATATAGGTTGCCTGATTGGAGATCCAACAGTGATGGTAGCATTCCATGTCCCCCAAAGAAATACGGTGGCTGTGGTTATTCACCGTTGAATTTAAGCCGTATCTTCAAGATGAATTGGGTTGCAAAATTGGTGAAAAATGCGGAGGAGATGGTTAGTGGCTGCCAGATTAATGAAGTTGGAGGATCAGAAACCAATTTGAATGATCTCGAACTTTACCAATATTCTCACAGGGAGGCCAGTGATGATAATTATCTGTACTGTCCGGCATCTGAAGATCTCAAAACTGATGGGATAGGAAATTTCAGAAAGCACTGGAAAAATGGTGAACCCATAATTGTCAAGCAAGTATTTGGTAGGTCATCAAGCTGGGATCCAATGGCCATATGGAGAGGAGTCCAAGAGACAGCAGATGAGAAAATGAGAGAAGCTGAGAACAGGGTGGTTAAGGCTTTGGATTGTTTAACCTGGTCAGAGATGGATATCGAACTCAATGAATTCATGAAAGGGTACTTTGAGGGGCGTACCCATGAGAATGGTTTGCCACAATTATTGAAGTTGAAGGATTGGCCTTCACCTAGTGCATCTGAAGAATTTTTATTGCATCAAAGACCTGAGTTTATCCGCAAGCTGCCTTTACTTGAATATATTCACTCAAAGTGGGGCCTTCTTAACGTTGCAGCTAAATTGCCTCATTACTCCTTACAAAATGATGTAGGACCGAAGATTTATATATCATATGGGGTCAATGAGGAACTTGGTAGTGGTGACTCAGTGACCAATCTCCACTTCAATATGCGTGACATGGTCTATCTTTTGGTCCATACAAGTGAAGTGAAGCCGAAGAACTTGCAGGGAACGAAAAGTGAAAAGATACAGAAATCATCTGATGAAAATGAATTGCCTGTGGATCCACAAATATGTTCAGTGGGGAGTCCAGCTGATTCATCACTGGGCACAGAAAAAAAGGGACTGGATTTGGATTCAAATGAGAAAACGCCAATTATCAATAAAGGGTTTGAAAATTATTCTAGTGCAGAAGTGGATATGATCAATTCTGAGCTTCCAGTCAAGGATGGAGATGTTGGGGAGAAAAAAGATCCTGGAGTTCTTTGGGATGTCTTTCGTCGGCAGGATGTTCCAAAGCTAACTGAATTTCTAAAAACACATTGTAAAGAATTTGCGCAGCCAAATGATATAGTAAATAAATTTGATGCAAGGCCTCTTTATGATGGAGTTATTTTTCTTAACAGACGCCATAAAAGGGAGTTGAAGGAAGAATTTGGAGTGGAGCCATGGTCATTTGAACAGTGTGTGGGGGAAGCTGTATTTGTTCCTGCAGGGTGCCCTTTTCAAGCAAGGAATGTTCAGTCCACTGTTCAGCTGGGCCTTGATTTCTTATCACCGGAAAGCCTGGGGGAGGCTGTGAGATTGGCTGAGGATGTCCGCTGTCTGCCAAATGAACATGAAGCCAAGCATCAAGTATTGGAGGTTGCGAAGATATCACTTTATGCCGCAAGTTCAGCCATCAAAGAAGTTCAGAAACTCGTTATTGACCCAAAACTTGGTGCAGAGATTGGATTTGGGGACCCCAATTTGACTGCAATGGTTGCTGAGAACTACGAGAAGATGGTTAAGTGGAGACAGATTTCTTGTGCTTGA 2667 0.4196 MSMPDKTVCEKHYIQAKKRAANSAMRASLKKAKRKSLGESDIYLESKSEDFDMPLASMKVERHSASGKNKASKNQFRYTAETPTTRTTSGRNAPKLNHDSPDDIPQYEENWMSYESPPASRMDLSRKRSQTNLDVNAATEYSDGSTDSSDDTGGQTCHQCRRNDRDRVIWCLRCDRRGYCESCILTWYSDMSLDEIQRTCPACRGTCNCKICLRGDNSIKVRIREIPILDKLQYLHVLLSSVLPVVKQIHHEQCYEVELEKKLRGIEIDLPRTKLNADEQMCCNFCRIPITDYHRHCPNCTYDLCLNCCQDLREANVNPEKITPTDEAILSNQNLLYRLPDWRSNSDGSIPCPPKKYGGCGYSPLNLSRIFKMNWVAKLVKNAEEMVSGCQINEVGGSETNLNDLELYQYSHREASDDNYLYCPASEDLKTDGIGNFRKHWKNGEPIIVKQVFGRSSSWDPMAIWRGVQETADEKMREAENRVVKALDCLTWSEMDIELNEFMKGYFEGRTHENGLPQLLKLKDWPSPSASEEFLLHQRPEFIRKLPLLEYIHSKWGLLNVAAKLPHYSLQNDVGPKIYISYGVNEELGSGDSVTNLHFNMRDMVYLLVHTSEVKPKNLQGTKSEKIQKSSDENELPVDPQICSVGSPADSSLGTEKKGLDLDSNEKTPIINKGFENYSSAEVDMINSELPVKDGDVGEKKDPGVLWDVFRRQDVPKLTEFLKTHCKEFAQPNDIVNKFDARPLYDGVIFLNRRHKRELKEEFGVEPWSFEQCVGEAVFVPAGCPFQARNVQSTVQLGLDFLSPESLGEAVRLAEDVRCLPNEHEAKHQVLEVAKISLYAASSAIKEVQKLVIDPKLGAEIGFGDPNLTAMVAENYEKMVKWRQISCA 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g3224 888 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 40 852 IPR045109 GO:0032454|GO:0033169
Alju03g3224 888 ProSiteProfiles Zinc finger RING-type profile. 157 204 IPR001841 -
Alju03g3224 888 MobiDBLite consensus disorder prediction 69 95 - -
Alju03g3224 888 SMART cupin_9 535 818 IPR003347 -
Alju03g3224 888 Gene3D Cupin 417 827 - -
Alju03g3224 888 MobiDBLite consensus disorder prediction 22 108 - -
Alju03g3224 888 MobiDBLite consensus disorder prediction 137 156 - -
Alju03g3224 888 MobiDBLite consensus disorder prediction 619 633 - -
Alju03g3224 888 MobiDBLite consensus disorder prediction 619 665 - -
Alju03g3224 888 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 150 217 IPR018866 -
Alju03g3224 888 SUPERFAMILY Clavaminate synthase-like 438 827 - -
Alju03g3224 888 ProSiteProfiles JmjC domain profile. 528 818 IPR003347 -
Alju03g3224 888 MobiDBLite consensus disorder prediction 137 157 - -
Alju03g3224 888 Pfam JmjC domain, hydroxylase 703 797 IPR003347 -
Alju03g3224 888 MobiDBLite consensus disorder prediction 32 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g3224 Alju-ChrAlju03 56528520 56534350 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Alju03g3224 JmjC 2.6e-07 CL0029
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju03g3224 03 56528520 56534350 Alju03g3224 03 56528520 56534350 ECH