Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g3205 ATGTTCTTCCGGGCCACTATTTTTAGGCACGGATGGGCATTGCGGCCTACAAGGCCACATCGTGAAGGGCAGAGAGAGATCGTCTGCTCTGCAACAATGGGGATCGATCTCAAAGCTGGTGGAAAGAGCAAGAAGACCAAAAGAACGGCACCCAAGTCCAATGATATCTACCTCAAGCTTCTTGTCAAGCTTTATCGCTTTCTAGTCCGGAGAACTGAAAGCAGTTTCAATGCTGTGATACTCAAGCGTCTTTTTATGAGCAAAGTCAACAAGGCTCCACTTTCTTTGTCAAGATTGATAAAGTTCATGAAGGGGAAGGAAGATAAGATTGCAGTGTTGGTGGGTACAGTGACTGATGATACACGAGTTTATGAAGTTCCGACATTGAAAGTTGCCGCACTCCGGTTTACAGAGACAGCGCGTGCAAGGATAGAGAAGTCTGGTGGTGAGTGCTTGACTTTTGATCAGCTGGCTCTCAGGGCTCCTCTGGGACAGAACACGGTCCTTCTTAGAGGCCCCAAGAATTCTCGTGAGGCTGTGAAGCATTTTGGTCCTGCTCCTGGTGTGCCGCATAGCCACACCAAGCCTTATGTGCGATCAAAGGGAAGGAAGTTTGAGCGTGCTAGAGGAAGGAGGAACAGCAAAGGATTCAGGGTTTAA 660 0.4833 MFFRATIFRHGWALRPTRPHREGQREIVCSATMGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTESSFNAVILKRLFMSKVNKAPLSLSRLIKFMKGKEDKIAVLVGTVTDDTRVYEVPTLKVAALRFTETARARIEKSGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGRRNSKGFRV 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g3205 219 SUPERFAMILY Ribosomal proteins L15p and L18e 52 171 IPR036227 -
Alju03g3205 219 Pfam Ribosomal protein 60S L18 and 50S L18e 34 219 IPR021131 -
Alju03g3205 219 MobiDBLite consensus disorder prediction 183 219 - -
Alju03g3205 219 FunFam 60S ribosomal protein L18 33 219 - -
Alju03g3205 219 Gene3D - 33 219 - -
Alju03g3205 219 PANTHER 60S RIBOSOMAL PROTEIN L18 33 219 IPR000039 GO:0003735|GO:0005840|GO:0006412
Alju03g3205 219 MobiDBLite consensus disorder prediction 196 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g3205 Alju-ChrAlju03 56391664 56393576 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g3205 35 219 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 78.495 1.25e-103 295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju03g3205 03 56391664 56393576 Alju03g3205 03 56391664 56393576 CCT
Alju03g3205 03 56391664 56393576 Alju03g3205 03 56391664 56393576 ECH