Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g3204 ATGCTGGGCATATGCACCACCGTCCTGGAAATCTGGAATGGAGTACCCTACATTACAATCGTTGTTGTGAAGCAAGCATCTCTGGGAGGTGGTGGCCTTCAAACCTGCTGGGAGGAGCGGCTTAATATATCCAAGATGTCGGGGGACGGACGGAACAAAAGGAGATTAGCCATCATTGGCGTCTCTTCAGTGTTGCTGGTGGCATTGGTGGTGGCCGTGACGGTTGGCGTGACGTGGAGTCAATCGGAGTCGGAGGAGGACGACAGGAGCACCGACAAGATAGTGTCTAACAAGGTGAAAGCAGTGCAGAGCCTGTGCGCGCCCACGGACTACAAGAAAGAATGCGAGGAGAGCCTGGTGGCGGAGGGCAGCAACAGCACCGACCCAAAACAACTCATCATGAGCGCCTTCAACATCACCATCAAGAAGATCGAGAAGGGCATTCATGAATCCAATCTCTTGCACGAGGCCGAGAAGGATCCACGATCCAAGGAAGCCCTCCAAACCTGCAAGCACCTCATGGATCTTTCCATCGGCGAGTTCAGGAAATCACTCGCCACCTTCCAGACCTTCGATTTCTACAGCCTCGACAAGATTCTCATGAACCTCAAGGTCTGGCTCAGCGGCGCCATCACCTACCAGGAAACCTGCATCGAAGGCTTCGAGGAAGTCAAAAGCGACGCTGGTCTCAAGATGAAGCAGGCCCTCTCATCCGCCATGCACATGAGCAGCAACGGCCTCGCCATCGTCAACGACATGGCCGAGGCTTTATCCAGCTTGCACATCACAAAACAAGGAAGGCGTCTTCTTAATGATCAAGAGGACGGCGGCGGGAACGAGGACGGATCCGCCGCCAAATCCGATGGCGGCGACTTCGATCTCCCCTCGTGGATCGACGAGAATCCTGCCGCTCGGAGACTGATGACGACGAGCGAGCATAAGGGCAAACTGAAGCCTGACGTGGTGGTGGCTAAGGACGGGAGTGGGAAATACAAGAAAATCAAAGACGCGCTGAAGCGCGTGCCCAAGAAAAACAAGAAGCCGTTTGTGATCTACATCAAGGAAGGGGAGTACAAAGAGCACGTGGAGGTGGAGAAGCACATGACGTACGTTGTGTTCGTGGGGGATGGCGGCAACAAGACCCGCATCACCGGCAAAAAGAACTTCGCCGCCGGGGTCGGCACCTACAGGACCGCCACGGTGGCCGTTGAAGGGGACCACTTCATCGCCATCAACATGGGGTTCGAGAACTCAGCCGGTCCCGACGGACATCAGGCCGTGGCACTCAGGGTTCAATCCGACTTCTCCATATTCTACAAATGCCAAATGGATGGGTACCAGGACACGCTTTACGTGCACACCATGCGTCAGTTCTACAGGGACTGCGTCATCACCGGCACCATAGACTTCATCTTCGGTGATGCCGCCGTCGTCATGCAGAACTGCACATTCGTGGTGAGGAAGCCGAACGAGAACCAGCAGTGCATAGTGACGGCGCAGGGCAGGAAGGAGAGGCACCAGCCGTCGGCGCTGGTGATCCAGGGAGGGTCCATAGTGTCGGACCCACAGTACTACAAAGTAAGGTTCAAGAACAAGGCGTACCTGGCACGTCCATGGAAGAACTTCTCCAGGACCATCATAATGGAAACCTTCATAGACGACTTGATTCAGCCAGAGGGATTTCTCAAGTGGGACGCTAACTCCACATCCTACAAGACATGCTGGTACGGTGAGTTCAACAACACAGGGCCCGGTGCCGACATGAGTAATCGCGTCAAGTGGAACGGGATCAAGAATCTGACGGCTCAGCATTCTCTGGATTTCACGCCCCTGAGGTACTTCAAGACAGATTACTGGATTAGGGACACTAGGATTCCTTACAATTCCGGCCCCATGTACCTCCCTGCCCTTAATTCCAAAAAGATCTCCTCTCAGTGA 1938 0.5449 MLGICTTVLEIWNGVPYITIVVVKQASLGGGGLQTCWEERLNISKMSGDGRNKRRLAIIGVSSVLLVALVVAVTVGVTWSQSESEEDDRSTDKIVSNKVKAVQSLCAPTDYKKECEESLVAEGSNSTDPKQLIMSAFNITIKKIEKGIHESNLLHEAEKDPRSKEALQTCKHLMDLSIGEFRKSLATFQTFDFYSLDKILMNLKVWLSGAITYQETCIEGFEEVKSDAGLKMKQALSSAMHMSSNGLAIVNDMAEALSSLHITKQGRRLLNDQEDGGGNEDGSAAKSDGGDFDLPSWIDENPAARRLMTTSEHKGKLKPDVVVAKDGSGKYKKIKDALKRVPKKNKKPFVIYIKEGEYKEHVEVEKHMTYVVFVGDGGNKTRITGKKNFAAGVGTYRTATVAVEGDHFIAINMGFENSAGPDGHQAVALRVQSDFSIFYKCQMDGYQDTLYVHTMRQFYRDCVITGTIDFIFGDAAVVMQNCTFVVRKPNENQQCIVTAQGRKERHQPSALVIQGGSIVSDPQYYKVRFKNKAYLARPWKNFSRTIIMETFIDDLIQPEGFLKWDANSTSYKTCWYGEFNNTGPGADMSNRVKWNGIKNLTAQHSLDFTPLRYFKTDYWIRDTRIPYNSGPMYLPALNSKKISSQ 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g3204 645 ProSitePatterns Pectinesterase signature 2. 464 473 IPR033131 -
Alju03g3204 645 FunFam Pectinesterase 314 631 - -
Alju03g3204 645 Gene3D Invertase/pectin methylesterase inhibitor family protein 97 254 IPR035513 -
Alju03g3204 645 Pfam Plant invertase/pectin methylesterase inhibitor 101 249 IPR006501 GO:0004857
Alju03g3204 645 SUPERFAMILY Pectin lyase-like 318 628 IPR011050 -
Alju03g3204 645 NCBIfam pectinesterase inhibitor domain 84 252 IPR006501 GO:0004857
Alju03g3204 645 PANTHER PECTINESTERASE 65 621 - -
Alju03g3204 645 MobiDBLite consensus disorder prediction 270 295 - -
Alju03g3204 645 FunFam Pectinesterase 98 254 - -
Alju03g3204 645 Gene3D - 314 631 IPR012334 -
Alju03g3204 645 Pfam Pectinesterase 320 615 IPR000070 GO:0030599|GO:0042545
Alju03g3204 645 SMART PMEI_2 97 249 IPR006501 GO:0004857
Alju03g3204 645 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 101 253 IPR035513 -
Alju03g3204 645 CDD PMEI-like_3 104 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g3204 Alju-ChrAlju03 56387951 56390630 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g3204 49 630 Carbohydrate Esterase AT3G05610 47.341 0.0 584