Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g3195 ATGGCGACGAGGAACCGCACTTTGCTCTACAGGAAGTACAGAGATGCATTGAAGAGCGTTCGGGTTCCGTCGAGTTCCGCCGGTGCTGGTGGTCCGGTGATTGAATTGGTCAGCACATCGCTTTTGAATCAGAATCGTTCTTATGCTCCGCTTAGTACCGAGGATCCGGGTAATTCAAGTAAGGGTCCACTTACTGTAGGACTACCTCCAGCTTGGGTGGATGTATCTGAAGAAATATCAGCAAATGTGCAACGGGCACGCACAAAAATGGCAGAGTTGGCGAAAGCTCATGCAAAAGCTTTAATGCCATCATTTGGAGATGGTAAGGAGGAACAACGAGCCATTGAAACTCTAACTCATGAGATAACTGACTTGATAAAGAGATCAGAGAGGCGACTGCAGAGACTTTCTGCTACCGGGCCTTCTGAGGATTCCGGTGTGAGGAAGAACGTGCAGCGTTCTCTAGCTACTGACCTTCAGAACCTCTCTGTAGAGCTCCGCAAGAAACAATCAAATTATTTGAAGCGACTTAGGCAGCAAAAAGAGGTGGGTCAAGATGGGGTGGATCTAGAGATGAACATAAATGGAAGTAAATCCAGATTTGAAGATGATGCTTTGGACAATATGGTATTTAACGAGCATCAGATGTCCAAGCTGAAAAAAAGTGAAGCATTCACTATTGAAAGAAAAAAGGAGATCCAACAGGCAAGTAAAAGTTCCTTATTTACTGTTGTGGAATCAGTAAACGAGCTTGCTCAAATAATGAAAGATTTGTCTGTACTAGTAATAGACCAGGGAACCATTGTTGATCGAATAGACTACAACATTCAGAATGTTGCAACCACAGTTGAGGATGGCCTGAAACAGCTGCAGAAGGCCGAGAGAACACAAAAAAAGGGGGGCATGGTGATGTGTGCGACGGTGCTTGTTATCATGTGCTTCGTTATGCTGGTTCTCTTAATCCTTAAGGAAATACTTTTGATTTGCTCAAGTGGAACTACAGAAATGAAAAGAAGCTGGTGTGGCAAGGATGTCAATATGGCAATGGAAATGAAGCAGTTTGGGATATTATTCCTGCACAGCAGCGGGGACTGCAAATCTCATAGGATAAGGCTTTATGATTCATTCAGTAAATAA 1137 0.438 MATRNRTLLYRKYRDALKSVRVPSSSAGAGGPVIELVSTSLLNQNRSYAPLSTEDPGNSSKGPLTVGLPPAWVDVSEEISANVQRARTKMAELAKAHAKALMPSFGDGKEEQRAIETLTHEITDLIKRSERRLQRLSATGPSEDSGVRKNVQRSLATDLQNLSVELRKKQSNYLKRLRQQKEVGQDGVDLEMNINGSKSRFEDDALDNMVFNEHQMSKLKKSEAFTIERKKEIQQASKSSLFTVVESVNELAQIMKDLSVLVIDQGTIVDRIDYNIQNVATTVEDGLKQLQKAERTQKKGGMVMCATVLVIMCFVMLVLLILKEILLICSSGTTEMKRSWCGKDVNMAMEMKQFGILFLHSSGDCKSHRIRLYDSFSK 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g3195 378 Gene3D - 69 285 - -
Alju03g3195 378 PANTHER SYNTAXIN 75 312 IPR045242 -
Alju03g3195 378 SMART tSNARE_6 226 293 IPR000727 -
Alju03g3195 378 SMART SynN_4 63 178 IPR006011 GO:0016020
Alju03g3195 378 FunFam Syntaxin-43 69 285 - -
Alju03g3195 378 Coils Coil 76 96 - -
Alju03g3195 378 SUPERFAMILY t-snare proteins 68 286 IPR010989 GO:0016020|GO:0016192
Alju03g3195 378 CDD SNARE_syntaxin16 228 292 - -
Alju03g3195 378 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 231 293 IPR000727 -
Alju03g3195 378 Pfam SNARE domain 267 319 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g3195 Alju-ChrAlju03 56332779 56337344 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g3195 1 327 SNARE and Associated Proteins AT5G26980 74.850 1.19e-177 494
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju03g3195 03 56332779 56337344 Alju03g3195 03 56332779 56337344 ECH
Alju01g0467 01 3510816 3515350 Alju03g3195 03 56332779 56337344 ECH