Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g3192 ATGAAATTTATTCTGAAGTTTTTGTTAGTCAATCCATTCTCTAGAGTCGTATTAATTTGGCGTGTGAAATTTCTGTGCAAGAACTCTGATGTATTCTCAAATGTTATATATAGTTGCCCTGAAGGCCAAATCCCTTCATTAATCAATCACAACTCCATTCGCTTTTTGCATGAGGGCTACCTGCTAATCCCTATAATATTCCTAAAGAGATTTGTGGTGGACATAGTGGTGGAGATTGGGGAGGGGAGTGTCGATGGTAAGATGGATCTAAATGTGAAGGAATCTTCATCGGATGAATCGAGTGACATCAATAAGTGCTGCGCTGATTGCAAAACCACTAAAACTTCACTCTGGAGAGTAGGGCCAGCTGGGCCCAAGACGCTATGCAACGCTTGTGGGATTAGATACAGGAAGAGAAGGGCTTCTCCGGTGAGATTGAACAAAAGGCTCGATAGGAAAAGAGATAGAACTCATAATTCAAGCGGCGGCGCCGTTGATGCCGTCACCGTCGCGGTCATCTCCACATCTGCCGCAGCCACTTGTGACAATCAGTGGAGGGAATCTTTGGAAATGAACATGGTAGGATGGGGTGAGGAGGTTTTGTTGCAGAGTGTGCCGGCTGTTTTGAAGAAACAGAGATGCCAGAGGAAAAGGAAGGTAGGGGAAGTGGAGGAAGCGGCTTTCTGTTTGATGGCATTATCCTGTGGCTTTGCTTTCGCTTAG 723 0.4537 MKFILKFLLVNPFSRVVLIWRVKFLCKNSDVFSNVIYSCPEGQIPSLINHNSIRFLHEGYLLIPIIFLKRFVVDIVVEIGEGSVDGKMDLNVKESSSDESSDINKCCADCKTTKTSLWRVGPAGPKTLCNACGIRYRKRRASPVRLNKRLDRKRDRTHNSSGGAVDAVTVAVISTSAAATCDNQWRESLEMNMVGWGEEVLLQSVPAVLKKQRCQRKRKVGEVEEAAFCLMALSCGFAFA 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g3192 240 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 101 141 - -
Alju03g3192 240 CDD ZnF_GATA 107 158 IPR000679 GO:0006355|GO:0043565
Alju03g3192 240 ProSiteProfiles GATA-type zinc finger domain profile. 101 137 IPR000679 GO:0006355|GO:0043565
Alju03g3192 240 PANTHER OS01G0976800 PROTEIN 92 238 - -
Alju03g3192 240 SMART GATA_3 101 153 IPR000679 GO:0006355|GO:0043565
Alju03g3192 240 Pfam GATA zinc finger 107 140 IPR000679 GO:0006355|GO:0043565
Alju03g3192 240 Gene3D - 103 163 IPR013088 GO:0006355|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g3192 Alju-ChrAlju03 56322338 56327545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g3192 94 240 C2C2-Gata Transcription Factor Family AT5G49300 37.162 6.35e-22 86.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Alju03g3192 GATA 3.5e-16 CL0167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju03g3192 03 56322338 56327545 Alju03g3192 03 56322338 56327545 ECH