Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g3165 ATGGCATCTTTGGAATCAGTTGTGGATCCTATAAGTTCAGAGACGTACCAAGAAGGCAGTCAGAGAAAGCGAAGGAAAATCGGGCACGATGCCAGCAACGATCAGAATTCGCTTGCTGCGATTCCGTGGAGATCTGACACAGAGCAGCGGATCTATTCCTCCAAACTCGTCGAAGCTCTCCGCCGCGTTCTTCGCCAGGGTTCTTCTTCCACGGCCAAACCTCGCCTCGGGCGCGATGTTCGTGAGGTCGCCGACAGGGTTCTCGCAGTGACAGCGAAAGGCAGGACTCGGTGGAGTCGGGCGATATTGACCTCTCCGCTCAGTCGGAGAAAGTTCCAGAGGCAGCATAAGAAGGTCAAGAAGGCGGTGAACGGATTGAAGAAACCAGAGGTTAGAAGAGAGAGAAGGAGGCTGCCGGCCGCGCAGAGGAAAGCGCGAGTTCTCGGCCATTTAGTTCCCGGTTGCCGGAAGGTTTCGTTTCCGAGTCTTCTGGAAGAAACCACTGATTATATTTCGGCCTTGGAAATGCAAGTTCGAGCCATGACAGCACTCACAGAGCTGCTCGGAGGTGGCGCGCCGGCCAATCGGCTCGGGCAGCCTCGACCGTGA 609 0.5583 MASLESVVDPISSETYQEGSQRKRRKIGHDASNDQNSLAAIPWRSDTEQRIYSSKLVEALRRVLRQGSSSTAKPRLGRDVREVADRVLAVTAKGRTRWSRAILTSPLSRRKFQRQHKKVKKAVNGLKKPEVRRERRRLPAAQRKARVLGHLVPGCRKVSFPSLLEETTDYISALEMQVRAMTALTELLGGGAPANRLGQPRP 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g3165 202 CDD bHLH_AtIBH1_like 132 185 IPR044549 GO:0006355
Alju03g3165 202 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 128 192 IPR036638 GO:0046983
Alju03g3165 202 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 125 174 IPR011598 GO:0046983
Alju03g3165 202 MobiDBLite consensus disorder prediction 1 17 - -
Alju03g3165 202 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 44 188 IPR044660 GO:0006355
Alju03g3165 202 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g3165 Alju-ChrAlju03 56182350 56182958 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g3165 12 181 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 45.055 1.86e-38 130
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g0284 01 2207825 2208433 Alju03g3165 03 56182350 56182958 CCT
Alju03g3165 03 56182350 56182958 Alju03g3165 03 56182350 56182958 ECH
Alju01g0284 01 2207825 2208433 Alju03g3165 03 56182350 56182958 ECH