Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g3111 ATGGCAGAGAAGCCGACTGAGCCCATTCGCCCAGGAATCACAGGCAGCTCCTCCCATCTTGCTTCCACGTATGGCAATGATTTTGTTGAGCTGGTTTGGCAAAATGGCCAAATTCTGGTGCAAGGAGGGTCATCGAGTAGAACAATGAAGAGGCCTTCTTGCTTTGGTTATTCTATGAACCCCTCCCATGAAGCTTACGACGGAGATCACTGTATCGCAAAACGGGCAAGGTCAAACACCTTATACTCGCTTTTGGACTCTTCCCATCGAATTCCCCGACAAACCAACGACCCATGTTCCTATCCGTTTGATTTTAGTAATAAGCATGGGGATCAATTTTCCAATTTGAGAGCAGAAAGAGAATCTGATTCCAAGCCCACTGGGGGGAGTACTCAATTATGCTCAACTTCCTTGCAGACCCTTAAGCATGGCTTGGGATCTGATGAAAGGGTTGAAAAGATTAATTTCTCCAACTTCTTGAGACCTGCATTGCTTTTCAAATCTACTTATCAGGGAAACAGTGCAAATCGGCACCCAAACAGTGGCGTTTCAGCTAGATTGGAGGAGATCAAGGCAACTGATGGTGGTAGTAGTAAAGCTCTTGATCATTCCGTTGTGATTGACTCGGCTAAGGGATCACCTAGTCTCAAGTACGGAGTTCATCCTGGCCAAACAGTTTTCACTTCTAATAAAGCAAACTCAACAACACCCTTTGATGGAAAAAAGGATCAGGATACACTACTCCCTGATGAACAATCCGAAGCTGTTGGATGCGATAGGGCCCTCAGGAGTCAGGGATCACATGGTCAATATCATCATCAAACACACAGTAGAAAAGGAAAAACAACCGTTGAGTTTTCTCGTGCATCCTTGGTAGCATCTTCTTCTCTGTGCTCTCTTGGAGCCTCGAATGACCCTACTCTCCGTAGCAGGAAACACGAGGACACCGACGACTCAACCTATACAAGCGATAATGATGAACAAACAGAAGATACGACGCTAAAGGAAACGCCGGCTCAAGATGGTTCAACAGACCAGAGAATCAGGAACACGCAGACGCATAATTTATCGGAGAGGGTGAGGAAGGAATTTTTTTTTTTCTTTTTACTAGACACACAGGTGGACAAGGTTTCAATGCTGGACGATGCCATCGATTATCTGAAGACCCTCAAGCTTCAGTTGCAGGTATTATCAATGGGAAGTGGGGTTTGTATGCCTCTAATGATGTCGATGTTAGGCATAGGCATCCCTAGCAGCCTACCTCATCATCAGTTTCTTCCACAAATGATTCCAGCAGGTTTCCCCAATCACGTCCTTCCCAATATTCAATTCCCAATAATGTCCCAACAATCACCTTTCGTTTCCATGCCTCCCAAGCCTATCCAACCCTATCTCTCTTCCCACCTCTCCACTTTTGATCATCACGACTCTGATCTTAACGCGCAGCTTGTTTCTGCAGCTATGCCAAAAGTTACTCAGTCGAATGAAAAGTTGTGTGCCATGTGTCTGACGTCAACGCATTTATATTTTTATCCCAAAATGATAATACTAATTCTTAAGAAAATAATCAAAATATAG 1578 0.4449 MAEKPTEPIRPGITGSSSHLASTYGNDFVELVWQNGQILVQGGSSSRTMKRPSCFGYSMNPSHEAYDGDHCIAKRARSNTLYSLLDSSHRIPRQTNDPCSYPFDFSNKHGDQFSNLRAERESDSKPTGGSTQLCSTSLQTLKHGLGSDERVEKINFSNFLRPALLFKSTYQGNSANRHPNSGVSARLEEIKATDGGSSKALDHSVVIDSAKGSPSLKYGVHPGQTVFTSNKANSTTPFDGKKDQDTLLPDEQSEAVGCDRALRSQGSHGQYHHQTHSRKGKTTVEFSRASLVASSSLCSLGASNDPTLRSRKHEDTDDSTYTSDNDEQTEDTTLKETPAQDGSTDQRIRNTQTHNLSERVRKEFFFFFLLDTQVDKVSMLDDAIDYLKTLKLQLQVLSMGSGVCMPLMMSMLGIGIPSSLPHHQFLPQMIPAGFPNHVLPNIQFPIMSQQSPFVSMPPKPIQPYLSSHLSTFDHHDSDLNAQLVSAAMPKVTQSNEKLCAMCLTSTHLYFYPKMIILILKKIIKI 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g3111 525 PANTHER TRANSCRIPTION FACTOR PIF3 374 483 IPR044273 GO:0003700|GO:0006355
Alju03g3111 525 MobiDBLite consensus disorder prediction 335 349 - -
Alju03g3111 525 MobiDBLite consensus disorder prediction 227 283 - -
Alju03g3111 525 MobiDBLite consensus disorder prediction 302 349 - -
Alju03g3111 525 MobiDBLite consensus disorder prediction 227 241 - -
Alju03g3111 525 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 352 407 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g3111 Alju-ChrAlju03 55844474 55848744 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g3111 154 457 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09530 26.506 1.51e-15 77.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju03g3111 03 55844474 55848744 Alju03g3111 03 55844474 55848744 ECH