Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g3109 ATGGATCACAGCCCTCATCGTCCCTCTCGTGAGTTGACCTTCTTCAGCTCCGGCGACTTTCTCCCCCGTAATTCAGATCCAACAGTCGGCCGCCACCATCCTCCCCTCAAGGAAATGGATTTCTTCTCCCGTTCAGTTGACAAAAACTCTGATTCTAGCCCGCCTCATCATCAGGATCCAGATCATGACGACGACCGCCACGACGGAAATGGATCGTTTCCTCCCACTGATCGGCCTGTAAACACGGGCCTAAATCTAACGCGTGTAGGTTCTGAAACGCCAGTAGAGGTTGATGAAAATCTTAACACCGAGCTGAGCATAGTCCAAGGTGAATTACGGAGGCTGCATGCAGAGAACAGGAAGTTGAGAACTATGCTCGACCAGATCACCAAAAGCTATAGCCAACTACAAGCTCAGCTGTTCATCGCTCTGCAAAAACAAAACCCTATGAAGGTTGATGCAAATGGCATAGGGTCGGGGAAACAATTGAGGGACCCACAGCCATCTCCCAATGATGCATCGATCTCCGATGATAAGACTCAATCAGTTTCGGCGCCCTCAAACAATGCGGAGAGTTGGGAGTCATCCATGAGCACCAGGTTACAAGAATCCAAGAGATCAGACGAACAAGTTTCAGATCAGGTCCCCTTCAGGAAAGCCAGGGTTTCCGTACGCGCAAGATCAGAAGCTCCTCTGATAAGCGATGGATGTCAATGGAGAAAATATGGTCAGAAAATGGCAAAGGGCAATCCTTGCCCTCGTGCGTATTATCGTTGCACTATGGCCGTAGGATGCCCAGTTCGCAAGCAGGTGCAAAGGTGTGCGGAGGACAAGACAGTGCTGATAACTACCTACGAAGGAAATCACAACCACCCTCTCCCTCCGGCCGCCACCGCCATGGCGAATACAACATCGGCGGCGGCCGCAATGCTCCTTTCCGGCTCAACATCAAGTACGAGCAAGGAAGGCTTAACACATTGTGCGGGATACATGGGTTCGATGGCCTACCCCTACGCATCAATGGCCACATTATCAGCGTCTGCACCATTTCCAACTATCACCTTGGACTTGACCCAAGTCCCAAATGGCATGCAGCTGCAACGAGCACATCCCTCATCATCAATGCCAGTAATGTTTCATGGGATTCCTCAGGGACAGCTAACACGACATCCCATGATGTTCCCACAGAACTTGCTTCAACTAGGGCAAAGGCTGCCTTCCAATTCGTCGTCTATGGTTGAGACGGTGAGTGCAGCCATTGCTTCTGATCCCAATTTGACTGCAGCATTGGCGGCTGCAATCTCATCCATCATAGGGGCATCGGGCGGCGGCGGCGGAGAAGCGGATAGTAACACGGTTGCTGCACCTACCGGAGCTGCTATAAATATTCCAGATAATGCCTTTAACCCCAACATTCCTGTGCTGCCTCTCTCCCCGCAACTTCCTCGTTCTTGCACTACGCTCTCCACCAACTAG 1476 0.5142 MDHSPHRPSRELTFFSSGDFLPRNSDPTVGRHHPPLKEMDFFSRSVDKNSDSSPPHHQDPDHDDDRHDGNGSFPPTDRPVNTGLNLTRVGSETPVEVDENLNTELSIVQGELRRLHAENRKLRTMLDQITKSYSQLQAQLFIALQKQNPMKVDANGIGSGKQLRDPQPSPNDASISDDKTQSVSAPSNNAESWESSMSTRLQESKRSDEQVSDQVPFRKARVSVRARSEAPLISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKTVLITTYEGNHNHPLPPAATAMANTTSAAAAMLLSGSTSSTSKEGLTHCAGYMGSMAYPYASMATLSASAPFPTITLDLTQVPNGMQLQRAHPSSSMPVMFHGIPQGQLTRHPMMFPQNLLQLGQRLPSNSSSMVETVSAAIASDPNLTAALAAAISSIIGASGGGGGEADSNTVAAPTGAAINIPDNAFNPNIPVLPLSPQLPRSCTTLSTN 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g3109 491 SMART WRKY_cls 233 293 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju03g3109 491 SUPERFAMILY WRKY DNA-binding domain 226 294 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju03g3109 491 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 96 446 IPR044810 GO:0003700
Alju03g3109 491 Pfam WRKY DNA -binding domain 235 292 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju03g3109 491 MobiDBLite consensus disorder prediction 1 86 - -
Alju03g3109 491 ProSiteProfiles WRKY domain profile. 228 294 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju03g3109 491 Coils Coil 112 139 - -
Alju03g3109 491 MobiDBLite consensus disorder prediction 153 214 - -
Alju03g3109 491 Gene3D WRKY domain 217 295 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju03g3109 491 FunFam probable WRKY transcription factor 31 218 295 - -
Alju03g3109 491 MobiDBLite consensus disorder prediction 30 72 - -
Alju03g3109 491 MobiDBLite consensus disorder prediction 162 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g3109 Alju-ChrAlju03 55819218 55821656 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g3109 10 491 WRKY Transcription Factor Family AT4G01720 44.163 4.44e-86 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Alju03g3109 WRKY 5e-24 CL0274