Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g3106 ATGGGTGAGAATGGCTTGGATGGCGATGCGACAGAGCATGATAAGGCAACCACATCAGAGAATCACGCAGAAACCAGCACAAACGAGGAAAACAGAGAGATGGCTAAGCAAAAACGAAAAGCCGACACAGTTCCATTTCACAAGCTGTTCTCATTTGCGGATTCCACCGATATTCTGTTAATGATCGCTGGCACCATTGGGGGCATTGGAAACGGTTTGGCTTTGCCTCTCATGACGTTACTGATGGGCCAAATGATCAATGCTTTTGGTAGTAACCAGCAAAGCAGCGATATCACTGCAGAAGTTTCCAAGGTTTCTTTGAAATTTGTGTACTTGGCAATAGGAAGTGGCGTGGCAGCATTTCTTCAGGTGTCTTGCTGGATGATCACAGGGGAAAGACAGGCTGCGCGAATAAGGGGATTGTATCTGAAAACCATACTAAGACAAGACGTTACTTTCTTCGATAAGGAAACAAACACCGGAGAGGTGGTCGGGAGAATGTCCGGCGATACTGTTCTCATACAGGATGCCATGGGAGAGAAGGTTGGGAAATTTCTGCAACTATTTTCAACATTTATCGGCGGTTTCGTGGTAGCATTTATTAAAGGATGGCTTCTTTCACTCGTCATGTTGTCCATTATTCCATTGCTTGTGGCATCCGGGGGATCCATGGCCTTCTTTATAGGAAGGATGGCTTCCCGTGGTCAAACGGCTTATGCAAAAGCTGCAAATGTCGTCGAGCAAACTCTTGGCTCTATTAGAACTGTTGCATCCTTCACCGGTGAAAAGGAAGCAGTGTCTAGATACAATAAATTTCTTGGGGATGCTTACAAATCAGGAGTCCGTGAAGGTTTTGTAGGCGGCCTTGGTTTCGGCACGGTTATGTGTGTGTTTTTCTGTGGTTATGCTTTGGCTGTATGGTTTGGCGCAAAGATGATACTGGAAAAAGGATACAACGGCGGAACGGTGATTAATGTGATTGTAGCTATATTAACCGCTTCCATGTCTCTTGGTCAGGCCACCCCTTGCTTGAGTGCTTTTGCTGCCGGTCAAGCTGCGGCTTATAAAATGTTCGAGACAATAGAGAGAAAGCCAGAGATAGACTCTTACAATCCAAACGGTAAAATATTAGAGGACATTAACGGCGACATAGGGTTGAAGGATGTTTACTTTAGTTATCCAACTAGACCCCAGGAGCTAATATTCAATGGGTTCTCTCTTCATATACCAAGTGGCACCACTGCTGCCTTGGTTGGAGAGAGTGGAAGTGGGAAGTCAACAGTCATTAGCTTAATCGAAAGATTCTACGATCCACAGGCTGGTGAAGTTCTTATTGATGGCGTCAATTTGAGAGAACTTCAGCTTAGATGGATTAGGGGTAAAATCAGCCTCGTCAGCCAGGAGCCCGTATTGTTTGCATCTAGCATTAAGGATAACATCTTATATGGAAAGGAGGGAGCAACAATTGAAGAAATAAAGGCTGCAGCTGAACTTGCAAATGCTGCTAAGTTCATCGACAAATTGCCACAGGGATACGACACAATGGTTGGTGAGCATGGAACTCAACTGTCTGGTGGACAAAAACAGCGTATTGCTATTGCGAGAGCAATTATAAAAGATCCAAGAATACTTCTTCTAGATGAAGCGACGAGTGCTCTAGATGCAGAGTCTGAAAGGATAGTTCAAGAGGCTCTGGATAGGGTCATGGTCAACCGAACTACTGTTATTGTGGCTCATCGGTTGAGCACAGTGAGGAATGCTGATATGATTGCTGTGATTCATAGGGGAAAGATGGTTGAAAAAGGAACGCATTCAGAGTTGCTCGAGGATCCCGAGGGCGCTTACTCTCAGCTTGTACGCTTGCAAGAAGTAAACAAAGAGTCAGGGGAACCTTCAGAGCGTCAAAATAAAAGTGACATTTCCGTAGAATCATTCAGGCAATCGAGCCAAAGGAGGTCGCTTCGGAGATCCATAAGTCGTGGATCATCTGTCGGCAACAGTAGCAGGAACTCATTTTCAGTACCGTTTGGCATGCCCACTGTAGTTAACGTCCCTGAACCCGAACTTGAAAAATTAGACGCAAAAAAACAATTGCCACCGGTTCCACTTCATCGCCTTGCTTCCCTTAACAAGCCTGAAATCCCAGTGCTTCTGCTCGGATGTGTGTCTGCCATTATAAATGGTGCAATACTTCCGGTATTTGGTTTGTTGATTTCCGTTGTTATCAAAACATTCTACGAGCCACCTCATGAGATGAAAAAGGATTCCAAGTTTTGGGCTTTTATTTTTTTGGCCCTCGGCATTGCATCTCTGCTTGCAGTTCCATCCCGAGGATACTTGTTTTCTGTAGCTGGATGTAAGTTAATCCAACGCATCAGACTGATGTGTTTTGAGAAGGTTGTAAACATGGAGGTTGGTTGGTTTGATAACCCAGAGCACTCAAGTGGAGCGATAGGTGCAAGGCTTTCGGCAGATGCTTCGACAGTGCGAGCCCTTGTTGGTGATGCTCTGGGTCTTCTGATTCAAAATATAGCATCGTCGTTGACTGGTTTAGTTATTGCTTTCGTTGCGAGCTGGGAGTTAGCTTTAATTATTCTGGTCATTATTCCCCTGATTGGGGTGAATGGATATGTTCAAATGAAATTCATGAAGGGTTTTAGTGCAGATGCAAAGATGATGTACGAAGAAGCAAGCCAAGTAGCTAATGATGCTGTTGGAAGCATCAGAACAGTAGCTTCTTTCTGTGCCGAAGATAAGGTAATGGAACTGTATAGGAAGAAATGCGAAGGCCCCATGAAATCTGGGATGCGGCTAGGCTTGATAAGTGGAATCGGATTTGGGTGTGCGTTTTTCTTACTTTTTAGTGTCTATGCAACAAGTTTCTATGCCGGAGCTAGACTTGTGGATGCTGGCAGAACTACGTTCTCAGCCGTTTTTCGGGTTTTCTTTGCTCTGACAATGGCGGCAATGGCAGTTTCCCAGTCGAGCTCTATGGCTCCAGATTCTAGCAAAGCCAAGTCAGCCACTTCTTCCATATTTGAACTAATTGACAGGAAGTCCCAGATAGACCCCAGCGACGAGTCTGGTGCCACGTTGGACAACGTTAAGGGAGAAATTGAGCTTCGTCATGTGAGCTTCAAATATCCATCCAGACCAGATATACAAATTTTCCGAGACCTCAGTTTGGCCATTCATTCGGGCAAGACAGTGGCCCTTGTTGGAGAGAGTGGAAGCGGGAAATCGACAGTGATTGCACTGCTGCAAAGATTTTATGACCCAGACTCAGGTGAGATCACGCTTGATGGAAGAGAACTTCGAACGTTGCAGATAAAGTGGTTGAGACAGCAGATGGGGCTGGTGAGCCAGGAACCAGTGTTATTCAATGACACTATCCGTGCCAATATTGCTTATGGAAAAGGAGGCGATGCCACTGAAGCGGAAATCATAGCCGCAGCAGAGCTAGCCAACGCTCATAAGTTCATAAGCGGCTTACACCAGGGTTATGACGCGGTAGTGGGGGAGAGGGGGCTGCAGTTATCAGGGGGGCAGAAACAGAGAGTGGCTATAGCACGTGCCATAATAAAGAGTCCAAAGATATTACTGCTGGATGAGGCCACGAGTGCGTTAGATGCAGAGTCAGAGAGAGTAGTGCAAGAAGCATTAGACAAAGTGATGGTGAATAGGACTACGGTGGTTGTGGCGCACCGTCTATCCACTATCAAGAATGCGGATGTGATTGCGGTGGTCAAGAACGGCGTCATTGTGGAGAAAGGAAGGCACGAGTCGTTGATTAACATTAAAGATAGCTTCTATGCGTCCCTTGTCCAGCTTCATACAAGTGCTTCTGCTGTATGA 3855 0.4573 MGENGLDGDATEHDKATTSENHAETSTNEENREMAKQKRKADTVPFHKLFSFADSTDILLMIAGTIGGIGNGLALPLMTLLMGQMINAFGSNQQSSDITAEVSKVSLKFVYLAIGSGVAAFLQVSCWMITGERQAARIRGLYLKTILRQDVTFFDKETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLFSTFIGGFVVAFIKGWLLSLVMLSIIPLLVASGGSMAFFIGRMASRGQTAYAKAANVVEQTLGSIRTVASFTGEKEAVSRYNKFLGDAYKSGVREGFVGGLGFGTVMCVFFCGYALAVWFGAKMILEKGYNGGTVINVIVAILTASMSLGQATPCLSAFAAGQAAAYKMFETIERKPEIDSYNPNGKILEDINGDIGLKDVYFSYPTRPQELIFNGFSLHIPSGTTAALVGESGSGKSTVISLIERFYDPQAGEVLIDGVNLRELQLRWIRGKISLVSQEPVLFASSIKDNILYGKEGATIEEIKAAAELANAAKFIDKLPQGYDTMVGEHGTQLSGGQKQRIAIARAIIKDPRILLLDEATSALDAESERIVQEALDRVMVNRTTVIVAHRLSTVRNADMIAVIHRGKMVEKGTHSELLEDPEGAYSQLVRLQEVNKESGEPSERQNKSDISVESFRQSSQRRSLRRSISRGSSVGNSSRNSFSVPFGMPTVVNVPEPELEKLDAKKQLPPVPLHRLASLNKPEIPVLLLGCVSAIINGAILPVFGLLISVVIKTFYEPPHEMKKDSKFWAFIFLALGIASLLAVPSRGYLFSVAGCKLIQRIRLMCFEKVVNMEVGWFDNPEHSSGAIGARLSADASTVRALVGDALGLLIQNIASSLTGLVIAFVASWELALIILVIIPLIGVNGYVQMKFMKGFSADAKMMYEEASQVANDAVGSIRTVASFCAEDKVMELYRKKCEGPMKSGMRLGLISGIGFGCAFFLLFSVYATSFYAGARLVDAGRTTFSAVFRVFFALTMAAMAVSQSSSMAPDSSKAKSATSSIFELIDRKSQIDPSDESGATLDNVKGEIELRHVSFKYPSRPDIQIFRDLSLAIHSGKTVALVGESGSGKSTVIALLQRFYDPDSGEITLDGRELRTLQIKWLRQQMGLVSQEPVLFNDTIRANIAYGKGGDATEAEIIAAAELANAHKFISGLHQGYDAVVGERGLQLSGGQKQRVAIARAIIKSPKILLLDEATSALDAESERVVQEALDKVMVNRTTVVVAHRLSTIKNADVIAVVKNGVIVEKGRHESLINIKDSFYASLVQLHTSASAV 1284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g3106 1284 Gene3D ABC transporter type 1, transmembrane domain 107 1013 IPR036640 GO:0005524|GO:0016020
Alju03g3106 1284 CDD ABC_6TM_Pgp_ABCB1_D1_like 61 345 - -
Alju03g3106 1284 SUPERFAMILY ABC transporter transmembrane region 47 368 IPR036640 GO:0005524|GO:0016020
Alju03g3106 1284 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1039 1276 IPR003439 GO:0005524
Alju03g3106 1284 FunFam ABC transporter B family member 1 1029 1279 - -
Alju03g3106 1284 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 62 349 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju03g3106 1284 PANTHER ABC TRANSPORTER B FAMILY 23 624 IPR039421 -
Alju03g3106 1284 Pfam ABC transporter 1058 1207 IPR003439 GO:0005524
Alju03g3106 1284 CDD ABC_6TM_Pgp_ABCB1_D2_like 707 1022 - -
Alju03g3106 1284 FunFam ABC transporter B family member 1 697 1005 - -
Alju03g3106 1284 Gene3D - 1029 1282 IPR027417 -
Alju03g3106 1284 ProSitePatterns ABC transporters family signature. 1179 1193 IPR017871 GO:0005524|GO:0016887
Alju03g3106 1284 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 718 1004 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju03g3106 1284 Pfam ABC transporter transmembrane region 61 335 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju03g3106 1284 Pfam ABC transporter transmembrane region 717 990 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju03g3106 1284 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 384 620 IPR003439 GO:0005524
Alju03g3106 1284 MobiDBLite consensus disorder prediction 641 671 - -
Alju03g3106 1284 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1029 1276 IPR027417 -
Alju03g3106 1284 ProSitePatterns ABC transporters family signature. 523 537 IPR017871 GO:0005524|GO:0016887
Alju03g3106 1284 MobiDBLite consensus disorder prediction 624 671 - -
Alju03g3106 1284 CDD ABC_MTABC3_MDL1_MDL2 1039 1277 - -
Alju03g3106 1284 Gene3D - 382 635 IPR027417 -
Alju03g3106 1284 FunFam ABC transporter B family member 9 48 380 - -
Alju03g3106 1284 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 373 622 IPR027417 -
Alju03g3106 1284 MobiDBLite consensus disorder prediction 626 640 - -
Alju03g3106 1284 FunFam ABC transporter B family member 1 374 623 - -
Alju03g3106 1284 SMART AAA_5 411 603 IPR003593 GO:0016887
Alju03g3106 1284 SMART AAA_5 1066 1259 IPR003593 GO:0016887
Alju03g3106 1284 Pfam ABC transporter 403 551 IPR003439 GO:0005524
Alju03g3106 1284 CDD ABC_MTABC3_MDL1_MDL2 384 622 - -
Alju03g3106 1284 MobiDBLite consensus disorder prediction 1 40 - -
Alju03g3106 1284 SUPERFAMILY ABC transporter transmembrane region 700 1023 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g3106 Alju-ChrAlju03 55786944 55791972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g3106 34 1278 Calmodulin-binding Proteins AT2G36910 44.929 0.0 1071