Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g3104 ATGAACCAAAAAGTGGTTGTGTCCGCTGTTTCTATCATCCTCGTGGTCGGTGTGGCCCTCGGCGTCGTCGGCGTCGTTAACTACAGGAACAAGGGCAGCAGCAACAATGCGCAGCAAGAGACAAACACCCAGAACAAGGCCGTTGCCTCCCTGTGCCAAAACTCCGACGACCCCCAGCTCTGCCACAACACGCTCGACCCCGTAAACAGCACCGACCCTAAGGATTATATAAAGGCAGTGGTGGAATCCGCCATGAAGACCGTTATATCGTCCTTTAACTTGACGGACAGAATTGAAGTAGAGCACAGGAACGGGTCCACAAGAGGCATAAAGATGGCCGTCGAGGATTGCAAGGACTTGCTGCAATCTGCGATCGCGGAACTGCAGGCATCGGGTGTGCTGGTTCAAGAAAACAATGCCCGGAGCGTGACCGACCGGGAAGATGACCTCAAGAATTGGCTGAGCGCCGTCATCGCGTACCAGCAATCCTGTCTGGATGGGTTTGAGGCGGAGAATGAGGGCGAGAAGGCAGTTCAGCAGCAATTGCAAACGGGCGGTCTGGACAACGTCGAGAAGCTCACAGGGTTGGCGCTAGACGTTGTGTCCGGCATTTCCCAGCTGCTCTCCGTCTTTGACTTGGACTTGGACGTCAAGCCTGCTTCCCGTCGCCTTCTGAGTAACGTGGATTCCGACGGCTATCCCACTTGGCTGTCGGGCCGCGACCGCAAGCTCATCGAGCAGCCCAACACTGGACATCCTACCGATGGGCCCAACGCCGTGGTTGCCCAGGACGGAAGTGGCCAGTTCAAGACCATTCAAGAAGCCGTCGACTCGTACCCCAAGAATTTCGAAGGCAGATTTACCATCTACGTCAAGGCCGGTATCTACAATGAATACGTCCACGTCACCAAGAAGCAGCCCAACATCTTCATGTACGGTGATGGCCCCACCAAGACCATTGTCACCGGCAACAGGAGCTACACCTCCGGCTGGAAAACAATCCAAACCGCCACCTTCACTACCTTGGCTGAGGGCTTCATTGCCAAGTCGATGGCCTTCGAGAACACCGCCGGGCCTGAAGGACACCAAGCAGTTGCACTGAGGGTGATGGGCGATCGCTCCGCTTTCTTCGACTGTGCCATCCGCGGCTACCAAGACACCCTATACGCACACGCCAAACGTCAATTCTACCGCAACTGTGAGATCTCCGGCACAGTGGACTTCATCTTCGGATACGGAAGCACCTTGGTCCAGAACTCCAGGATCTTGATCAGGAAGCCCATGGACAACCAGCAAAACATCGTCGTCGCTGATGGCACTGCCAACAAGCAAATGCGCACCGGAATTGTCCTCCAGAACTGCCAGATCATGGCCGACGCCAGCCTCAACGCCGACAGGCTGACCATCAAGTCCTACCTGGCCAGGCCATGGAAGGCATTCTCCAGGGCCATCTTCATGGAAAATGAAATGGGCGATCTCATCCAGGCCGATGGTTATCTTCCATGGATGGGCAGCATGTACCTTGACACCTGCTACTTCGCCGAGTATGCAAACTCCGGCCCCGGCGCAGCCACAAACAACAGGGTCAAGTGGGGCCACGGCGTCCTCACCAAGGATGAGGCAACTCAATACACCGCCGAATCTTGGCTCCAGGCCAGCACATGGCTCCCCGCCACCAGCATTGCCTTCGACAGCGGTTTCACCAAAGCTTAA 1713 0.5604 MNQKVVVSAVSIILVVGVALGVVGVVNYRNKGSSNNAQQETNTQNKAVASLCQNSDDPQLCHNTLDPVNSTDPKDYIKAVVESAMKTVISSFNLTDRIEVEHRNGSTRGIKMAVEDCKDLLQSAIAELQASGVLVQENNARSVTDREDDLKNWLSAVIAYQQSCLDGFEAENEGEKAVQQQLQTGGLDNVEKLTGLALDVVSGISQLLSVFDLDLDVKPASRRLLSNVDSDGYPTWLSGRDRKLIEQPNTGHPTDGPNAVVAQDGSGQFKTIQEAVDSYPKNFEGRFTIYVKAGIYNEYVHVTKKQPNIFMYGDGPTKTIVTGNRSYTSGWKTIQTATFTTLAEGFIAKSMAFENTAGPEGHQAVALRVMGDRSAFFDCAIRGYQDTLYAHAKRQFYRNCEISGTVDFIFGYGSTLVQNSRILIRKPMDNQQNIVVADGTANKQMRTGIVLQNCQIMADASLNADRLTIKSYLARPWKAFSRAIFMENEMGDLIQADGYLPWMGSMYLDTCYFAEYANSGPGAATNNRVKWGHGVLTKDEATQYTAESWLQASTWLPATSIAFDSGFTKA 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g3104 570 FunFam Pectinesterase 253 567 - -
Alju03g3104 570 CDD PMEI-like_3 50 205 - -
Alju03g3104 570 FunFam Pectinesterase 44 205 - -
Alju03g3104 570 SMART PMEI_2 43 200 IPR006501 GO:0004857
Alju03g3104 570 Gene3D - 254 567 IPR012334 -
Alju03g3104 570 Pfam Pectinesterase 258 552 IPR000070 GO:0030599|GO:0042545
Alju03g3104 570 SUPERFAMILY Pectin lyase-like 256 564 IPR011050 -
Alju03g3104 570 ProSitePatterns Pectinesterase signature 2. 402 411 IPR033131 -
Alju03g3104 570 PANTHER PECTINESTERASE 15 559 - -
Alju03g3104 570 Gene3D Invertase/pectin methylesterase inhibitor family protein 42 205 IPR035513 -
Alju03g3104 570 NCBIfam pectinesterase inhibitor domain 37 199 IPR006501 GO:0004857
Alju03g3104 570 Pfam Plant invertase/pectin methylesterase inhibitor 47 199 IPR006501 GO:0004857
Alju03g3104 570 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 45 202 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g3104 Alju-ChrAlju03 55769008 55770795 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g3104 1 567 Carbohydrate Esterase AT2G47030 40.992 1.20e-144 428