Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g3103 ATGGGTGGAAAAGTTCTCATCTCCGCAGTTTCCCTCATCCTCGTGGTGGGGGTAGCCATCGGCACTGTGATAGTGGTTCACAAGCAGACTAATAATGGCGACTCCTCCGGTGAAATCTCTTCCCATCAGAATACGGTGGTGGCACAGATGTGTCAGAACACCGACGACCCAAAGTTCTGCCAACAAACTCTGAGCCACGTCAATGACTCTGACCCAAAGGCATTCCTATCAGCCGTAGTGGAAGCAACCACCAACAGCGTCATCAAGGGCTTGAACATGAGCGACAGGCTCATTATGGATCACAGCAACGGCGAGAAAGGCGTCAAGATGGCCCTTGGTGACTGCAAGGACTTGCTCCAATTCGCCATGGACAGTCTTCAAATGTCCACTGACTTGTTGCACAACGACATCAAAACCGTGACCAACCAAACCCCAGACTTCAGGAACTGGCTGGCCGCCGTCATCTCCTACCAACAGGCCTGCATGGACGGCTTTGACGACAACAACGACGGCGAGAAACAGGTCAAGTCACAGTTGCAAGAGCAAGCATTAGACGGCATCGGCAAGATCACCGGTATCGCTCTCGACATCGTGTCTGATCTCTCCAAGATCCTTGGAAAGTTTGGGCTGCAGTTGGATTTGAAACCTGCTTCCCGCCGCCTTATGGAGGTGGACAGCGAAGGTTATCCGACGTGGTTCTCGGCATCTGACCGCAAGCTGTTGCAGAAGATGAAGACGGGACATCATTTGAAAGCCGATGTGGTGGTGGCTAAGGATGGCAGTGGAAACTTCAAGACCGTCGCAGAGGCCATTGCTTCCTATCCCAAAAATGGTCTCGGCCCCAAAGGCAGATACGTCATCTTCGTCAAGGCTGGTGTATACCAAGAGTACGTCATTGTTCCCAAAACTGCAGTGAACATCCTTATGTACGGTGAGGGCGCCGGTAAAACTGTCATCACCGGAAACAAAAACTTTGTTGATGGGGTCAAGACCATGCAAACAGCTACCTTTGCCAACACTGCTAATGGGTTCATCGCCAAGAAAATATCATTTGTGAACAGCGCGGGACCTGAAAAGCACCAAGCTGTGGCCCTGAGGAACCAGGGAGATATGTCGGCTTTCTTCAATTGCGCCATCCTGGGTAACCAAGACACCTTGTACGCTCAGACCAACCGTCAGTTCTACAAGAACTGCGACATCTCTGGTACGATTGACTTCATCTTCGGCGTGTCACCCACATTGATCCAGAGCTCTAGAATCATCCTGAGGAAGCCACTGGACAACCAATTCAACACAGTGACAGCAGACGGCACACCCCAGAAGAACATGCCCACCGGAATTGTGATCCAAAACTGCGATATCGTGCCGGAGCCAGCTCTGTTCCCTGTCAGGTTCCAATTGAAGTCATACTTGGGAAGGCCATGGAAGGCTTACTCAAAGACTGTGATCATGGAATCCAGAATCGGTGATGTTATTCATCCCGATGGATGGATTCCTTGGGAAGGAAACTTGTACCTCAACACCTTGTACTATGCTGAGTACAACAACGAAGGACCCGGTGCTAATGTGCAGGCTAGGATCAAGTGGCCTGGTTACAAGGGCCAGATCAGCAAGGCCGAAGCTCAGCAGTTCACCGCCGGCCAATTCCTCCGAGGTGGACCCGAATCCGACTCTGCCGTTTGGCTCAAGGCTCTCCACGTTCCTTATGACATTGGCTTCACCAAGGCTTGA 1731 0.5153 MGGKVLISAVSLILVVGVAIGTVIVVHKQTNNGDSSGEISSHQNTVVAQMCQNTDDPKFCQQTLSHVNDSDPKAFLSAVVEATTNSVIKGLNMSDRLIMDHSNGEKGVKMALGDCKDLLQFAMDSLQMSTDLLHNDIKTVTNQTPDFRNWLAAVISYQQACMDGFDDNNDGEKQVKSQLQEQALDGIGKITGIALDIVSDLSKILGKFGLQLDLKPASRRLMEVDSEGYPTWFSASDRKLLQKMKTGHHLKADVVVAKDGSGNFKTVAEAIASYPKNGLGPKGRYVIFVKAGVYQEYVIVPKTAVNILMYGEGAGKTVITGNKNFVDGVKTMQTATFANTANGFIAKKISFVNSAGPEKHQAVALRNQGDMSAFFNCAILGNQDTLYAQTNRQFYKNCDISGTIDFIFGVSPTLIQSSRIILRKPLDNQFNTVTADGTPQKNMPTGIVIQNCDIVPEPALFPVRFQLKSYLGRPWKAYSKTVIMESRIGDVIHPDGWIPWEGNLYLNTLYYAEYNNEGPGANVQARIKWPGYKGQISKAEAQQFTAGQFLRGGPESDSAVWLKALHVPYDIGFTKA 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g3103 576 Gene3D - 247 573 IPR012334 -
Alju03g3103 576 Gene3D Invertase/pectin methylesterase inhibitor family protein 43 202 IPR035513 -
Alju03g3103 576 PANTHER PECTINESTERASE 18 563 - -
Alju03g3103 576 Pfam Pectinesterase 253 552 IPR000070 GO:0030599|GO:0042545
Alju03g3103 576 SMART PMEI_2 42 197 IPR006501 GO:0004857
Alju03g3103 576 ProSitePatterns Pectinesterase signature 2. 400 409 IPR033131 -
Alju03g3103 576 FunFam Pectinesterase 247 573 - -
Alju03g3103 576 NCBIfam pectinesterase inhibitor domain 40 198 IPR006501 GO:0004857
Alju03g3103 576 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 46 201 IPR035513 -
Alju03g3103 576 ProSitePatterns Pectinesterase signature 1. 281 300 IPR018040 -
Alju03g3103 576 SUPERFAMILY Pectin lyase-like 250 556 IPR011050 -
Alju03g3103 576 CDD PMEI-like_3 50 203 - -
Alju03g3103 576 Pfam Plant invertase/pectin methylesterase inhibitor 46 197 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g3103 Alju-ChrAlju03 55762229 55764293 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g3103 1 573 Carbohydrate Esterase AT2G47030 37.948 6.49e-130 390