Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g3102 ATGAAGGGGAAAATAATTGTATCTGCAGTTTCCCTCATCCTTGTGGTGGGGGTGGTGATCAGCGCCGTTGTGGTGGTTAACAACAAGAACAAAGACCCTCAGATCACTGAGCGTCAGAATGCGGTGAAGGCGATGTGCCAGAACACGGAGGACCAAAAGCTTTGCCACGACACTCTGGGCAACGTGCTGAACAGCTCAGACCCAAAAGCATTCTTAGCCGCCGCCGTGGAGGCCTCCGCCAACAACGTCATCAAGGCCCTGAACGTGAGCAATAAGCTCAGCGTCGAACATGGCAACAGCACCCAAGGCATCGTCAAGATGGCCCTCGATGACTGCAAGGACTTTCTCGAATCCGCCATGGACAGCCTCCAGGCTTCCTTGGACTTCCTCGGTAACAACACCATCCAAACCTTGATTGATCGATCCCCTGACTTCAAGAATTGGCTGGCCTCCGTCGTCTCCTTCCAACAGGCTTGCATGGATGGGTACGATGAAAAGGTGGACGGTGCCACACAGATCAGGACTCAGCTTCAGGAGAATGGTTTGGACGACATGGGGAAGCTAACAGGCATAGCCCTTGATATAATGGCTGACTTGGAAAGCATCTTGAGTCAGTTTGGTCTGAAGATTAAAATGAACCCTTCTTCTCGTCGTCTTCTTGAGGTGGGCAGCGAAGGATATCCCACTTGGTTCTCAGCCTCTGACCGCAAGCTCATGGCCAACATGCGGAAGGGAAGGGGACATCATATCAGGCCCAACGCTGTGGTGGCCCAAGATGGCAGTGGCCAGTTCAAGACCATCATGGATGCCGTTAACTCTTATCCTAAGGGTTTCCAAGGAAGATATGTCATCTTCGTTAAGGCTGGTACATACCGTGAGTACGTCGTCATTCCCAAGACAGCCGTCAATATCCTCATGTACGGTCAGGGCACTGATAAAACCATCGTCACCGGTAACAGAAACAATGCTGATGGTTACACCACATCCGACACTGCTACTTTCGTGAATATGGCAAAGGGGTTCATCGCCAAGTACATGACATTTGTGAACACCGCTGGTCCTGAAAAGCACCAAGCAGTGGCATTCAGGAACCAGGGAGATATGTCGGCCTGTTTCGATTGTTCTTTTGTGGGATACCAAGACACGTTGTACGCTCAAACCAACCGTCAACTCTACAGGAACTGCGACATCTCCGGTACCGTTGACTTCATATTCGGAGTGTCCACGACGTTGATCCAGAGCAGTCGAATCATCGTGAGGAAGCCCATGGACAACCAGTTCAACACAGTGACGGCAGACGGCAGAATCCAGAAGAACCTGCCCACAGGAACAGTGATCCAGAACTGCGACATAGTTCCAGAGGATGCTCTGTTCCCGGTGAGGTTCAAGATAAGATCGTACCTGGGAAGGCCATGGAAGCAGTACGCGAGAACGGTGGTGATGGAATCAAGAATAGGTGACTTTGTTCAGCCAGAAGGCTGGACTCCATGGGCAGGAAACGCCTACCTCAACACATTGTACTACGCAGAGTACAACAACGAAGGACCTGGTGCTAATGTGGCCAAGAGAGTTAGGTGGCCTGGTTACAAGGGTCTCATCAGTAGGAATGAAGCCGCTCTGTTCACCGCCGGCGTATTCCTCAAGGGCGGGCCCACTTCCCGAGCTGAGGACTGGATGAAGCCCCTTCATGTTCCTTTTGACATCGGCTTCACCAAGGCCTAA 1722 0.5174 MKGKIIVSAVSLILVVGVVISAVVVVNNKNKDPQITERQNAVKAMCQNTEDQKLCHDTLGNVLNSSDPKAFLAAAVEASANNVIKALNVSNKLSVEHGNSTQGIVKMALDDCKDFLESAMDSLQASLDFLGNNTIQTLIDRSPDFKNWLASVVSFQQACMDGYDEKVDGATQIRTQLQENGLDDMGKLTGIALDIMADLESILSQFGLKIKMNPSSRRLLEVGSEGYPTWFSASDRKLMANMRKGRGHHIRPNAVVAQDGSGQFKTIMDAVNSYPKGFQGRYVIFVKAGTYREYVVIPKTAVNILMYGQGTDKTIVTGNRNNADGYTTSDTATFVNMAKGFIAKYMTFVNTAGPEKHQAVAFRNQGDMSACFDCSFVGYQDTLYAQTNRQLYRNCDISGTVDFIFGVSTTLIQSSRIIVRKPMDNQFNTVTADGRIQKNLPTGTVIQNCDIVPEDALFPVRFKIRSYLGRPWKQYARTVVMESRIGDFVQPEGWTPWAGNAYLNTLYYAEYNNEGPGANVAKRVRWPGYKGLISRNEAALFTAGVFLKGGPTSRAEDWMKPLHVPFDIGFTKA 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g3102 573 FunFam Pectinesterase 247 570 - -
Alju03g3102 573 Coils Coil 113 133 - -
Alju03g3102 573 SMART PMEI_2 37 195 IPR006501 GO:0004857
Alju03g3102 573 CDD PMEI-like_3 44 197 - -
Alju03g3102 573 Gene3D - 247 570 IPR012334 -
Alju03g3102 573 PANTHER PECTINESTERASE 17 560 - -
Alju03g3102 573 SUPERFAMILY Pectin lyase-like 250 566 IPR011050 -
Alju03g3102 573 Pfam Plant invertase/pectin methylesterase inhibitor 41 195 IPR006501 GO:0004857
Alju03g3102 573 ProSitePatterns Pectinesterase signature 2. 397 406 IPR033131 -
Alju03g3102 573 Pfam Pectinesterase 253 549 IPR000070 GO:0030599|GO:0042545
Alju03g3102 573 NCBIfam pectinesterase inhibitor domain 11 167 IPR006501 GO:0004857
Alju03g3102 573 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 196 IPR035513 -
Alju03g3102 573 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 200 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g3102 Alju-ChrAlju03 55757063 55759082 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g3102 1 570 Carbohydrate Esterase AT2G47030 39.539 1.07e-135 405