Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g3100 ATGAACTTCTCTTTCCTGAATCTGGAGGGACTCAAGTCAAGAGGCTCAAGCGCTTTATCCTACGCACTTCCCCTGCTTAACCTGCGCAAATTTCGCCGGTTTTGGAGCCGCGATCTTCATCTACACCTTCTCCCAGTTAGTTTCCAGCTCTCTGATCTCTCAACTCCAGTATATTGCCATTTGATTTTAGACCGAATCATGAGTTGTTTCAGCTGTTGCGAAGAGGATGAACACCTCAAAGCTGCTGAGAGTGGAGGACCATACGTGGTAAAAAGCTCAACAGGAAATGATGGAAATTATCATGCTTCCGAAGCTGCAAAGCAGGGTGCTCAGACTGTTAAAGTCCAGCCCATTGAAGTTCCTGCCATATCAGCAGATGAACTAAAAGAAATTACAGATAATTTTGGGACAAATTCTCTGATTGGGGAGGGGTCATATGGAAGAGTATATTATGGCGTTCTTAAAAATGGTCTGGCTGCAGCAATAAAGAAGTTAGATGCTAGTAAACAACCTGATGATGAATTTTTAGCCCAGGTTTCCATGGTGTCAAGGCTGAAGCATGAAAATTTTGTTCAATTACTTGGTTATTGTGTTGATGGAAGTTCCCGTGTTCTTGCTTATGAGTTTGCATCTAATGGATCTCTTCACGATATTTTACATGGCAGAAAAGGTGTTAAAGGCGCCCAACCTGGTCCTGTCCTGTCATGGGCACAGAGAGTAAAGATTGCCGTAGGAGCTGCAAAAGGGCTTGAGTACTTGCATGAGAAGGCCAATCCCCACATTATCCACCGAGACATCAAATCAAGCAATGTACTAATTTTTGATGATGATGTTGCTAAGATTGCAGATTTTGATTTGTCAAATCAGGCTCCTGATATGGCTGCACGTCTTCATTCCACTCGTGTCCTTGGAACCTTTGGTTATCATGCACCAGAATATGCAATGACCGGACAACTGAATGCTAAGAGTGACGTGTACAGTTTTGGCGTTGTCCTTCTGGAACTGTTGACTGGAAGGAAGCCTGTTGATCATACACTACCTCGTGGACAGCAGAGTCTGGTTACTTGGGCTACACCAAAACTCAGTGAAGATAAAGTCAGGCAGTGTGTTGATGCAAGACTAGGAGGAGATTACCCACCCAAAGCTGTTGCTAAGATGGCTGCTGTTGCTGCGCTATGCGTGCAATATGAGGCTGACTTCAGACCAAACATGAGCATTGTAGTCAAAGCTCTTCAACCTTTGTTGAATGCACGCCCTGGCCCTGCTGGTGAAACTGCAAATTGA 1284 0.4447 MNFSFLNLEGLKSRGSSALSYALPLLNLRKFRRFWSRDLHLHLLPVSFQLSDLSTPVYCHLILDRIMSCFSCCEEDEHLKAAESGGPYVVKSSTGNDGNYHASEAAKQGAQTVKVQPIEVPAISADELKEITDNFGTNSLIGEGSYGRVYYGVLKNGLAAAIKKLDASKQPDDEFLAQVSMVSRLKHENFVQLLGYCVDGSSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWAQRVKIAVGAAKGLEYLHEKANPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPKAVAKMAAVAALCVQYEADFRPNMSIVVKALQPLLNARPGPAGETAN 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g3100 427 Pfam Protein tyrosine and serine/threonine kinase 139 411 IPR001245 GO:0004672|GO:0006468
Alju03g3100 427 FunFam pto-interacting protein 1 211 422 - -
Alju03g3100 427 SUPERFAMILY Protein kinase-like (PK-like) 114 411 IPR011009 -
Alju03g3100 427 ProSitePatterns Protein kinases ATP-binding region signature. 141 164 IPR017441 GO:0005524
Alju03g3100 427 FunFam PTI1-like tyrosine-protein kinase 3 99 209 - -
Alju03g3100 427 ProSitePatterns Serine/Threonine protein kinases active-site signature. 261 273 IPR008271 GO:0004672|GO:0006468
Alju03g3100 427 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 70 419 - -
Alju03g3100 427 SMART serkin_6 135 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g3100 427 Gene3D Transferase(Phosphotransferase) domain 1 210 419 - -
Alju03g3100 427 CDD STKc_IRAK 141 414 - -
Alju03g3100 427 Gene3D Phosphorylase Kinase; domain 1 96 209 - -
Alju03g3100 427 ProSiteProfiles Protein kinase domain profile. 135 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g3100 Alju-ChrAlju03 55751721 55755170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g3100 123 412 Receptor kinase-like Gene Family AT4G02010 51.361 3.01e-91 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Alju03g3100 PK_Tyr_Ser-Thr 6.3e-46 CL0016