Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g3091 ATGGTGGCCGAAGCACACCTTATGCGTCCACAGAGCACCCCTGCGTTTGATTTTCAGTGTTTTCCTAACGGAACAAATATATGTGAGATCGACGATGCCGCTTCCACCAAGCCTCCGAGTCTTGACCGAGTTCGTGCTTCTCCATTAGCGTCTGCCGAGTTACTCAGTTCACAAGAAGATATTAAAGCTGCAGACGGAATGTCAAATGCTGCTCTTGATTCTGCTGTTATTCAATTTGTCCCTAGCATCCGTTCTGGTAGTTTTGCTGACATTGGCCCCCGAAGATACATGGAAGATGAACATATAAGGATAGATGATCTGTCTTCTCACATGGGATCACTATATACATTTCCTGAACCAAGTGCCTTCTATGGGGTATTTGATGGTCACGGAGGACCTGAAGCTGCAGCTTATATTCAGAAAAATGTAATGCGATTCTTCTTTGAAGAAGTTAGCTTCCCTCAGACATCTGCAGTTGATAATGTTTTTTTACAAGAGGCAGAGAACTCTCTCAGAAAATCATTTCTTTTGGCTGACGTAGCTTTGGCTGATGATTGCAGTGTGAGCAACTCATCAGGGACCACGGCCCTTACTGCCTTGATATTTGGAAGGCTTCTAATGGTGGCTAATGCTGGCGATTGCCGAGCAGTTCTCTGTCATAAAGGAGAGGCAATTGACATGTCTCAAGATCACAGGCCTATATATCCTTCAGAGCAGAGGCGAGTTGAGGAACTAGGCGGGCATGTAGATGATGGTTATCTTAATGGGGTTTTGTCAGTTTCTCGAGCCCTTGGGGACTGGGATATGAAGTTGCCTCGTGGTTCTCCCTCGCCCTTGATTGCTGAGCCTGAGTTTCGTCAAGTGGTTCTAACAGAGGATGATGAGTTCCTCATCATTGGCTGTGATGGAATTTGGGATGTCATGACAAGTCAGCAGGCAGTTAGTCTTGTTCGTAGAAGCCTGAGGGGATATTATGATCCAGAGCGATGTGCCAGGGACCTGGTCATGGAGGCACTACGCCTTAATACGTTTGATAATCTTACAGTGATTGTTGTGTGCTTCTCTTCTAATTCTATTGATCACAGGGAGCCATCCCCTCCTTGTCAGAGGAAATTGAGGTGCTGCAGCCTTTCTGCAGAGGCGCTTTGTAGCTTGAGGAACTTGCTGGAAGGCAGTGCAAGCAACTGA 1188 0.4646 MVAEAHLMRPQSTPAFDFQCFPNGTNICEIDDAASTKPPSLDRVRASPLASAELLSSQEDIKAADGMSNAALDSAVIQFVPSIRSGSFADIGPRRYMEDEHIRIDDLSSHMGSLYTFPEPSAFYGVFDGHGGPEAAAYIQKNVMRFFFEEVSFPQTSAVDNVFLQEAENSLRKSFLLADVALADDCSVSNSSGTTALTALIFGRLLMVANAGDCRAVLCHKGEAIDMSQDHRPIYPSEQRRVEELGGHVDDGYLNGVLSVSRALGDWDMKLPRGSPSPLIAEPEFRQVVLTEDDEFLIIGCDGIWDVMTSQQAVSLVRRSLRGYYDPERCARDLVMEALRLNTFDNLTVIVVCFSSNSIDHREPSPPCQRKLRCCSLSAEALCSLRNLLEGSASN 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g3091 395 FunFam Probable protein phosphatase 2C 22 68 357 - -
Alju03g3091 395 SUPERFAMILY PP2C-like 78 355 IPR036457 -
Alju03g3091 395 SMART PP2C_SIG_2 99 354 IPR001932 -
Alju03g3091 395 ProSiteProfiles PPM-type phosphatase domain profile. 84 354 IPR001932 -
Alju03g3091 395 SMART PP2C_4 74 352 IPR001932 -
Alju03g3091 395 Gene3D - 74 362 IPR036457 -
Alju03g3091 395 Pfam Protein phosphatase 2C 94 346 IPR001932 -
Alju03g3091 395 CDD PP2Cc 83 354 IPR001932 -
Alju03g3091 395 ProSitePatterns PPM-type phosphatase domain signature. 123 131 IPR000222 GO:0043169
Alju03g3091 395 PANTHER PROTEIN PHOSPHATASE 2C 73 352 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g3091 Alju-ChrAlju03 55706545 55709011 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g3091 97 391 PP2C-type Phosphatase Gene Family AT3G62260 68.919 1.46e-148 421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Alju03g3091 PP2C 3.3e-64 CL0238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju03g3091 03 55706545 55709011 Alju03g3091 03 55706545 55709011 ECH