Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g3083 ATGAAGTTGGAAGGCGAGAGTAGGAGGAAGAGACATCAGAGTGAAGATGAGATGGGAATAAGGAAGGGTCCTTGGACTGTGGAAGAGGACACCATTCTGGTCAATTACATCGCCATCCACGGCGAAGGTCGATGGAATTCGGTCGCCCGCTGTGCCGGCACGTACTCTGTTCTTTCTCTCTGCATGATTGCGCCTTCAAAGTTGTTAGGCCACAGTTTGAAGAGAACGGGCAAGAGTTGCAGGTTAAGGTGGCTGAACTACTTGCGTCCGGATGTTAGGCGTGGAAATATCACTCTGCAGGAACAGATAGTAATTCTTGATCTGCACACTCGATGGGGAAACAGGTGGTCGAAAATAGCGCAGCACTTGCCAGGAAGAACGGACAATGAGATTAAAAATTATTGGAGGACGAGGGTGATGAAGCAGGCGAAGCAGCTCAAGTGCGATGTCAACAGCAAGCAGTTCAGAGACACCATGCGTTACGTGTGGATGCCCCGCTTGCTGGAGCGGATACGGGCCCCCGCATCTGAATACGACCCGAACAGCCAACCCATCCCCGTCGACCCGAATCTCCCCTCCGTCACGCCTCGCAATATCCAGTTCCACCAAGCCCCGTCTTCTCATTGCCAGGCTCATCATGTTTCGGACGGTTCCCCAAGCGGGTCGGAAGTCTGCCCGCGGGTTGTATCGGAACAGGGAAATAGTGCCTTGTGTGGCGGTGGCGGTGGCGGGGAGTGGGCTGAGACATTGTGGAGCGACGACAATATTTGGTTTTTGCAACAACAACTTTTCGAAGATCCGTAA 804 0.5311 MKLEGESRRKRHQSEDEMGIRKGPWTVEEDTILVNYIAIHGEGRWNSVARCAGTYSVLSLCMIAPSKLLGHSLKRTGKSCRLRWLNYLRPDVRRGNITLQEQIVILDLHTRWGNRWSKIAQHLPGRTDNEIKNYWRTRVMKQAKQLKCDVNSKQFRDTMRYVWMPRLLERIRAPASEYDPNSQPIPVDPNLPSVTPRNIQFHQAPSSHCQAHHVSDGSPSGSEVCPRVVSEQGNSALCGGGGGGEWAETLWSDDNIWFLQQQLFEDP 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g3083 267 Gene3D - 23 93 - -
Alju03g3083 267 SMART sant 21 90 IPR001005 -
Alju03g3083 267 SMART sant 93 141 IPR001005 -
Alju03g3083 267 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 88 IPR017930 -
Alju03g3083 267 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 18 202 IPR044676 GO:0003700|GO:0006355|GO:0043565
Alju03g3083 267 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 89 143 IPR017930 -
Alju03g3083 267 SUPERFAMILY Homeodomain-like 18 135 IPR009057 -
Alju03g3083 267 ProSiteProfiles Myb-like domain profile. 17 88 IPR001005 -
Alju03g3083 267 CDD SANT 24 88 IPR001005 -
Alju03g3083 267 CDD SANT 98 137 IPR001005 -
Alju03g3083 267 ProSiteProfiles Myb-like domain profile. 89 139 IPR001005 -
Alju03g3083 267 FunFam MYB transcription factor 98 161 - -
Alju03g3083 267 Pfam Myb-like DNA-binding domain 22 88 IPR001005 -
Alju03g3083 267 Pfam Myb-like DNA-binding domain 94 137 IPR001005 -
Alju03g3083 267 Gene3D - 97 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g3083 Alju-ChrAlju03 55653323 55654297 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g3083 15 266 MYB Transcription Factor Family AT2G47190 50.182 2.62e-80 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju03g3083 Myb_DNA-binding 3.6e-14 CL0123