Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g3081 ATGGTTGCCAAAACTCATATCCAATTGATTCTGCTGCTTCTTTCATTTTCATGCGCCTCTTGCAAGCCTCCCACTTGGAACTCAGACAGGCTTACAGATTCTGAGAGTTGGATTTCTTGGAACCTCCAGAATTACCACAAGGCCACGCTTTTGAAGACTCAATGGAATGCTAAAGCCCCTGATGATGTTCTGAAGCTGCGGATGGCCGAGACTAACAGAGTTAAGATCACAGTTCGCCAGGACTCTACGGGCGACTTCAGCACCATCACACAAGCGCTGGACGGCATTCCACTGCGCAACACCGCAAGAGTTATAGTTTCCATTGGACCAGGCGTTTACAGGGAGAAGATTGTGATACCCAGAAATAAGCACTTCATAACATTGTTGGGGGACGCCACAAATCCGCCAACAATTACAGGGAACGATACGGCATCCGTCATTGGAAGGGATGGGATGCCATTTGGCACATTCCGCAGTGCCACCGTTGCTGTGGATGCTAATTATTTTGTCGCCGTCAACATCAGATTTGAGAACACGGCATGGCATGAGGTGGGAAAGGCGGGAGGACAAGCGGTGGCGCTTCGCATCTCAGGGACGAAAGGCGCATTTTACAACTGCAGCTTCTATGGGGATCAAGACACACTCTACGACCACAAAGGACTTCACTACTTCAATAATTGCTTCATTCAAGGCTCTGTTGATTTCATCTTCGGCTCCGGCAGATCCCTTTACGAGAACTGCAATCTGAGTTCAATAGCGAAGAAGGCGGTCTCAATCACGGCTCAGAAGCGCACAAATGCGTCGTTAGAGAGCGGGTTTTCGTTTAAGAACTGCTCCATAACGGGAAGTGGGCAAGTATATCTGGGAAGAGCGTGGGGGGATTATTCGAGGGTTGTTTTCTGTTACACCTACATGGACAAGATAGTTGTGCCCCAGGGCTGGAGTGACTGGGCTGACCAAAAGCGCGACTTGAGAGTGTATTATGGAGAATACAAGTGCAGTGGGCCTGGGGCTAACTTGACAGGAAGAGTGGCATGGGCACACATACTCACCGACCAACAGGCTCTGCCTTTTCTTGGAACCCATTTCATTGACGGCGACACTTGGCTCCTTCCCCTCCCCTTTTGA 1128 0.4982 MVAKTHIQLILLLLSFSCASCKPPTWNSDRLTDSESWISWNLQNYHKATLLKTQWNAKAPDDVLKLRMAETNRVKITVRQDSTGDFSTITQALDGIPLRNTARVIVSIGPGVYREKIVIPRNKHFITLLGDATNPPTITGNDTASVIGRDGMPFGTFRSATVAVDANYFVAVNIRFENTAWHEVGKAGGQAVALRISGTKGAFYNCSFYGDQDTLYDHKGLHYFNNCFIQGSVDFIFGSGRSLYENCNLSSIAKKAVSITAQKRTNASLESGFSFKNCSITGSGQVYLGRAWGDYSRVVFCYTYMDKIVVPQGWSDWADQKRDLRVYYGEYKCSGPGANLTGRVAWAHILTDQQALPFLGTHFIDGDTWLLPLPF 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g3081 375 ProSitePatterns Pectinesterase signature 2. 229 238 IPR033131 -
Alju03g3081 375 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Alju03g3081 375 Gene3D - 70 373 IPR012334 -
Alju03g3081 375 Pfam Pectinesterase 76 367 IPR000070 GO:0030599|GO:0042545
Alju03g3081 375 FunFam Pectinesterase 71 372 - -
Alju03g3081 375 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 68 370 - -
Alju03g3081 375 SUPERFAMILY Pectin lyase-like 74 372 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g3081 Alju-ChrAlju03 55635140 55636842 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g3081 76 372 Carbohydrate Esterase AT5G47500 45.667 3.80e-88 268
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju03g3081 03 55635140 55636842 Alju03g3081 03 55635140 55636842 ECH