Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g3074 ATGGAGAAGAAAGAGATGGGTGGTGTCAAGACGGAGGAAGCAGTTGGATCCTCTTCGTTTGGGGATTATGATTCAAACAGTTTCCCACTTCCCAACGTATTTGATTTTCATGAAGTCCATAAGAGCTCTTTAGGGTTTATGGAGTTACTGGGCGTGCAGGGGCAGGACTATGGTTCTTTCCTGCATTTGCCCCCGCACCTATTTCCTTCTCACCTCAACAATCAATGTGCCGCTGCAAATAACTACTGCGAGCCGTTGAATCAACAGCCCGCCACTCCAAACTCTTCATCCATTTCGTCTGCGTCCAGCGAGGCAGGGATGGATGAACACACTAAAACTGTAGATCAGCGAGGAGATGAGCAGCCAAACACCAAGAACCAGTTGAAGGCCAAGAAGACAAATCAGAAGAAACAGAGGGAACCGAGATTCGCGTTCATGACGAAAAGCGAGGTCGATCATCTGGATGATGGGTACAGGTGGAGAAAGTACGGTCAAAAAGCAGTGAAGAACAGCCCCTTTCCCAGAAGCTACTATCGTTGCACCAGTGCTTCATGTAATGTGAAGAAACGAGTGGAACGATCCTTCACTGATCCAACCATTGTTGTCACGACCTACGAAGGCCAACACACACATCAAAGCCCACTCATGCCTCGTAATTCCACTCCCGCCGGAGCTTTGGTGCCTGCGGTGGCTTCCGCCGGATGTGCTTCAGCCGCAACATCGGGAAACTTATCCCGGCAGTATCATGATGAGCAGCTCCAACATCATGATCATCATTTCCTTGCTAACACATTGTCGTCTTTGGGTTTTCCTCGCATTTGTGGTTCAAAGAGTAATATTGCCGCTTTTCCTCAAGACAGAATGCCTTGTAATCTAGGGACCAGTGCTTTTTTAAGGGACCATGGCCTTCTCCAAGATATTATTCCTTCCCATATGCTGAAAGAAGAGTAG 951 0.4805 MEKKEMGGVKTEEAVGSSSFGDYDSNSFPLPNVFDFHEVHKSSLGFMELLGVQGQDYGSFLHLPPHLFPSHLNNQCAAANNYCEPLNQQPATPNSSSISSASSEAGMDEHTKTVDQRGDEQPNTKNQLKAKKTNQKKQREPRFAFMTKSEVDHLDDGYRWRKYGQKAVKNSPFPRSYYRCTSASCNVKKRVERSFTDPTIVVTTYEGQHTHQSPLMPRNSTPAGALVPAVASAGCASAATSGNLSRQYHDEQLQHHDHHFLANTLSSLGFPRICGSKSNIAAFPQDRMPCNLGTSAFLRDHGLLQDIIPSHMLKEE 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g3074 316 ProSiteProfiles WRKY domain profile. 149 214 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju03g3074 316 MobiDBLite consensus disorder prediction 1 21 - -
Alju03g3074 316 SUPERFAMILY WRKY DNA-binding domain 146 214 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju03g3074 316 MobiDBLite consensus disorder prediction 108 126 - -
Alju03g3074 316 MobiDBLite consensus disorder prediction 87 107 - -
Alju03g3074 316 FunFam WRKY transcription factor 57 140 214 - -
Alju03g3074 316 Gene3D WRKY domain 139 215 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju03g3074 316 PIRSF WRKY_txn_fact_IIc 1 316 IPR017396 GO:0003700
Alju03g3074 316 Pfam WRKY DNA -binding domain 155 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju03g3074 316 SMART WRKY_cls 154 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju03g3074 316 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 87 245 IPR044810 GO:0003700
Alju03g3074 316 MobiDBLite consensus disorder prediction 87 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g3074 Alju-ChrAlju03 55577651 55579008 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g3074 20 316 WRKY Transcription Factor Family AT2G47260 43.360 2.13e-66 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Alju03g3074 WRKY 2.1e-26 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g0426 01 3216388 3217891 Alju03g3074 03 55577651 55579008 CCT
Alju03g3074 03 55577651 55579008 Alju03g3074 03 55577651 55579008 ECH