Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g3065 ATGTCGGTCCTCCCAGTTTCTATCTCAATCGGTGCCTTAATAGTCATTCAACCTCTGTTGCTGAAATGGTTGCTTGTATTATCTTGCTCAGTATTAATGGCTGGCTCTTATGCATTATCTCCGGCTAGACCACCTTCTGCTACTATGGTTGTTCATGATCTGCCACTACCAGCAAATCTCCATGGGCAAAAGCATCTACCATCCCATGGCGGACCAACCCCAACACCATCACCTACCCATCCTCCTTTATATAGTCCATCCTTGAGTACAGGTCGCCCCCCGGCAAGTTCACATTCATCTACTCCATTCATGAAGGGCAGTGAAATAGGACCTCATGTTTCTGGTTTTGGAGATAATGCCCCTATGCATTCAACAGCTGGTGCGATTCCTTCTGGTCTGGCTCAGCCACCCCTATCCCCTTATGTTTCCAATTGTTGTAAACCAAACATGGTGTTGAAGCGTGGGAGTAAGAGTTGTCACTGCGTGTATCCCATAAAACTAGACCTTCTCCTTTTGAATGTCACTCAAAACTCTAATTGGAATCTTTTTCTTGACGAATTAGCTACCCAACTTGGGTTGCAAATTTCCCAGATTGAATTGGTAAATTTTTATGTACTCACCCTATCAGCATTAAATATATCAATGGATATCACTCCACATAAAGGGATCAGTTTCTCTGCCAACGAAGCATCTGAAATAAACTCTACGCTTTCAATGCATAAGATGCAACTAAATCCTAGATTGGTGGGTGACTACAAACTTCTCAATTTGACGTGGTATGAGCCTCCGCCTCCATCTCAAGCTCCCATGTCTGTTGCATCTCCTATGAAAGCTCCTATTTACCACCACACAGCAACTTCAACACCAAGTTCTTCAAATAGGAGAGGGCATTCAAGTTTGTATGCTATTCTTGGAATTGGTGCTGGCATACTCTTCATTGCCATTATATCTGTACTCATACTTTGTTTATGCACATTGAGGCCGAAGACCAAAGGACCATTGATAGATACTGAGAAGCCAAGGACAGAAGGTGCAGTTTCAGCCGCAGGGTCTTTCCCTCATCCAACCAGCACAAGATTTATTGCTTATGAAGAACTTAAAGAAGCAACGAACAACTTTGAAGCAACAAGCTTACTTGGAGAAGGCGGGTTCGGTAGAGTTTTTAAGGGTGTCTTAAATGATGGTACTGCTGTAGCAATTAAGAGGCTTACTAATGGAGGGCAACAAGGGGATAAAGAGTTTTTGGTTGAGGTTGAAATGCTTAGTCGGTTGCATCATCGTAATCTTGTAAAATTGGTGGGGTACTATAGCAATCGTGACTCGTCACAAAATCTCCTATGCTATGAACTTGTTCCAAATGGAAGTTTGGAGGCCTGGCTCCATGGTCCTTTAGGAATAAATTGTCCTCTGGATTGGGATACCAGAATGAAGATTGCGCTTGATGCTGCAAGAGGACTTGCATACTTGCATGAAGACTCACAGCCCTGTGTTATACACAGAGATTTCAAGGCGTCCAACATATTGCTGGAAAACAACTTCCATGCTAAAGTTGCGGATTTTGGTCTTGCTAAGCAGGCACCTGAAGGCAGAGCTAATTACCTGTCCACTCGTGTCATGGGCACATTTGGGTATGTAGCTCCTGAGTATGCCATGACTGGTCATCTACTTGTTAAAAGTGATGTTTATAGCTATGGGGTTGTCTTGCTGGAACTGCTGACTGGAAGGAAACCTGTTGATATGTCACAACCAGCTGGACAAGAGAACCTGGTTACTTGGGCAAGGCCAATCCTAAGAGATAAAAACCGGTTGGAAGAGCTTGCTGATCCAAGGCTGGGGGGGAAATATCCAAAGGAAGATTTTGTCCGGGTTTGTACTATTGCTGCGGCCTGCGTCGCTCCTGAAGCAAGCCAACGACCTACAATGGGGGAAGTGGTACAGTCACTTAAAATGGTGCAGCGCATGACCGAACATCAGTATTCCATGGTGGCCCCCTCCAATACAAGGACTAACCTAAGACAGTCCTCCACCACTTTCGAGTCTGATGGGACATCTTCTATGTTCTCTTCAGGTCCCTACTCTGGTCTAAGTGTCTTTGACAATGACAATGTTTCTAGGACGGCAGTTTTCTCTGAAGATCTTCATGAAGGAAGATGA 2154 0.4443 MSVLPVSISIGALIVIQPLLLKWLLVLSCSVLMAGSYALSPARPPSATMVVHDLPLPANLHGQKHLPSHGGPTPTPSPTHPPLYSPSLSTGRPPASSHSSTPFMKGSEIGPHVSGFGDNAPMHSTAGAIPSGLAQPPLSPYVSNCCKPNMVLKRGSKSCHCVYPIKLDLLLLNVTQNSNWNLFLDELATQLGLQISQIELVNFYVLTLSALNISMDITPHKGISFSANEASEINSTLSMHKMQLNPRLVGDYKLLNLTWYEPPPPSQAPMSVASPMKAPIYHHTATSTPSSSNRRGHSSLYAILGIGAGILFIAIISVLILCLCTLRPKTKGPLIDTEKPRTEGAVSAAGSFPHPTSTRFIAYEELKEATNNFEATSLLGEGGFGRVFKGVLNDGTAVAIKRLTNGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSNRDSSQNLLCYELVPNGSLEAWLHGPLGINCPLDWDTRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRANYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPAGQENLVTWARPILRDKNRLEELADPRLGGKYPKEDFVRVCTIAAACVAPEASQRPTMGEVVQSLKMVQRMTEHQYSMVAPSNTRTNLRQSSTTFESDGTSSMFSSGPYSGLSVFDNDNVSRTAVFSEDLHEGR 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g3065 717 Pfam Protein kinase domain 374 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g3065 717 SUPERFAMILY Protein kinase-like (PK-like) 351 650 IPR011009 -
Alju03g3065 717 ProSitePatterns Protein kinases ATP-binding region signature. 379 401 IPR017441 GO:0005524
Alju03g3065 717 FunFam Receptor-like serine/threonine-protein kinase ALE2 353 450 - -
Alju03g3065 717 MobiDBLite consensus disorder prediction 84 104 - -
Alju03g3065 717 ProSitePatterns Serine/Threonine protein kinases active-site signature. 497 509 IPR008271 GO:0004672|GO:0006468
Alju03g3065 717 MobiDBLite consensus disorder prediction 60 104 - -
Alju03g3065 717 ProSiteProfiles Protein kinase domain profile. 373 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g3065 717 Gene3D Transferase(Phosphotransferase) domain 1 451 673 - -
Alju03g3065 717 PANTHER OS01G0750732 PROTEIN 143 675 - -
Alju03g3065 717 FunFam Receptor-like serine/threonine-protein kinase ALE2 451 666 - -
Alju03g3065 717 Gene3D Phosphorylase Kinase; domain 1 355 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g3065 Alju-ChrAlju03 55509598 55515118 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g3065 13 717 Receptor kinase-like Gene Family AT4G02010 67.511 0.0 971
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Alju03g3065 Pkinase 1.4e-44 CL0016