Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g3060 ATGGATGGTACTGCCTCGCCTAAACTCGGGTCAGAAGAAGCTACAGCTTTCACACCAGAAATTCAAGAATCCAAAAAAAGGAAAATGGTTCAGAAAACAGTTGTGAGGGTGAAAGTTGGAGAAAATGTTAGTAGACTAAAGAATGAAGGGCTACCATCGGACTCATGGTCTTGGAGGAAATATGGACAAAAGCCTATTAAAGGATCTCCTTATCCAAGAGGCTGCTACAAGGGCAGCACATCCAAAGTTTGTTCGGCCAAGAAGCAAGTAGAGAGATGCAGAACAGATGCTTCAGTGCTCATTGTCACCTATACTTCTTCCCATAACCATCCAGCGACAGAATTACCCTTCAAAGAATCAAAAACTCAAGCTACTGAAGATCCCTCACCTGATACTTCAAAGGCCAAAGACCAAGAGCAAGAGGAAGAGAAGAAAGAACTTCAACTTGCAAAAGTTAGCGATCAAGGTGCAAATGAAGAAAATTTTCATTACCTGCAATCCCCAATAGGCTGTTCTGAAGATATTATGATTGATGAGCAAGAGGATGTTTTCAAGTTGAATCCGGAGAAAACGCAAGAGAGGATAGATCCTCTTTTAGAGGTAGAGCCCCTCTGTTATTCTCAGCTGAAGGACCTCTCAACGCTCAAATCGGAGGAACTCGACTACTTCGACGAGCTACCCATGTCTCCATCTTTGTTGAACTTGATGAGGAACAACTTTCCCAACGAAAGGATTCCGGTGGCCCCGTCATGA 753 0.4343 MDGTASPKLGSEEATAFTPEIQESKKRKMVQKTVVRVKVGENVSRLKNEGLPSDSWSWRKYGQKPIKGSPYPRGCYKGSTSKVCSAKKQVERCRTDASVLIVTYTSSHNHPATELPFKESKTQATEDPSPDTSKAKDQEQEEEKKELQLAKVSDQGANEENFHYLQSPIGCSEDIMIDEQEDVFKLNPEKTQERIDPLLEVEPLCYSQLKDLSTLKSEELDYFDELPMSPSLLNLMRNNFPNERIPVAPS 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g3060 250 MobiDBLite consensus disorder prediction 120 150 - -
Alju03g3060 250 ProSiteProfiles WRKY domain profile. 47 113 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju03g3060 250 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 18 227 IPR044810 GO:0003700
Alju03g3060 250 Coils Coil 135 155 - -
Alju03g3060 250 SMART WRKY_cls 52 112 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju03g3060 250 Pfam WRKY DNA -binding domain 54 111 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju03g3060 250 MobiDBLite consensus disorder prediction 1 27 - -
Alju03g3060 250 MobiDBLite consensus disorder prediction 110 153 - -
Alju03g3060 250 Gene3D WRKY domain 38 113 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju03g3060 250 SUPERFAMILY WRKY DNA-binding domain 48 112 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g3060 Alju-ChrAlju03 55494094 55495071 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g3060 13 111 WRKY Transcription Factor Family AT1G30650 54.206 3.40e-30 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Alju03g3060 WRKY 2.6e-19 CL0274