Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g3050 ATGGCCTCGATTCAACACACTGCAAGCTCGGGATCCGAAGGGGTAGACCCACGATATACCGGATTGGACGAGAGAAAGAGAAAGAGGATGCTGTCCAACCGTGAGTCGGCGCGGCGATCCCGTATGAAGAAGCAAGTGCAACTTGAAGATCTTTCAAGCGAAATTAGCCGACTCAAAGCTGAAAACGGTAAGCTATTTCAGAGCATAAAGGCCAATGAGGAAGCATACGTTGAGATCGAATCCATTAACAATGTCTTGAGGGCTCAGACTAAGGAGTTGACCGATCGATTGCGGTTTCTGAACTCGATCCTTGAGATTGCTGAAGAGGTCAGTGGGCTTTCTGTAGAAATCCCTGAGATACCAGATGTTCTCTTGAACCCATGGCAGCTTCCTCTTCCAATGCAGCCCATCATGGCGTCCACGGTCGACATGATAATGCGCTGA 444 0.491 MASIQHTASSGSEGVDPRYTGLDERKRKRMLSNRESARRSRMKKQVQLEDLSSEISRLKAENGKLFQSIKANEEAYVEIESINNVLRAQTKELTDRLRFLNSILEIAEEVSGLSVEIPEIPDVLLNPWQLPLPMQPIMASTVDMIMR 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g3050 147 CDD bZIP_plant_GBF1 26 76 IPR045314 GO:0003700|GO:0006355
Alju03g3050 147 SMART brlzneu 21 85 IPR004827 GO:0003700|GO:0006355
Alju03g3050 147 MobiDBLite consensus disorder prediction 18 45 - -
Alju03g3050 147 Coils Coil 34 68 - -
Alju03g3050 147 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 28 43 IPR004827 GO:0003700|GO:0006355
Alju03g3050 147 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 23 86 IPR004827 GO:0003700|GO:0006355
Alju03g3050 147 MobiDBLite consensus disorder prediction 1 45 - -
Alju03g3050 147 FunFam BZIP transcription factor 23 74 - -
Alju03g3050 147 Gene3D - 23 78 - -
Alju03g3050 147 PANTHER BZIP TRANSCRIPTION FACTOR 44 6 144 - -
Alju03g3050 147 Pfam bZIP transcription factor 25 82 IPR004827 GO:0003700|GO:0006355
Alju03g3050 147 SUPERFAMILY Leucine zipper domain 25 79 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g3050 Alju-ChrAlju03 55431550 55431993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g3050 1 145 bZIP Transcription Factor Family AT3G62420 58.904 2.62e-54 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Alju03g3050 bZIP_1 4.6e-10 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g0437 01 3308810 3309241 Alju03g3050 03 55431550 55431993 CCT