Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g3021 ATGGGCCGGGCCCATATATCCTGCTCGACGAAAATGGTGTCCCTCAAGTTGCAGAAACGGCTCGCCGCCAGTGTCTTGAAGTGCGGCAGAGGCAAGGTTTGGCTGGATCCCAATGAAGCTAACGAAATCTCCATGGCCAACTCTCGCCAAAACATAAGGAAGTTAGTTAAGGATGGCTTCATTATCAGGAAGCCAACTAAAATTCACTCTCGATCTCGTGCTCGGCGTATGAAGGAGGCCAAGAGAAAAGGACGCCACTCTGGATATGGTAAGCGTAAGGGTACAAGGGAGGCAAGGCTTCCAACTAAAATCCTCTGGATGAGAAGGATGCGTGTGCTCAGACGCTTGCTTCGCAAGTACAGGGAATCCAAGAAGATTGACAAGCACATGTACCATGATATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGAGAGTTTTGATGGAGAGCATACACAAATCTAAGGCAGAGAAGGCAAGAGAGAAAACATTGTCTGACCAGTTTGAAGCCAAGCGCGCTAAGAACAAGGCAAGCAGGGAAAGGAAACTTGCCCGGAGAGAGGAGCGCTTGGCTCAGGGTCCTGGAGAAAAGACATCAGTAGCGCCTCCTGCTCCTGCTTCCCAGCCTGCCCAAGTATCAAAGAAATCAAAGAAGTAG 663 0.4902 MGRAHISCSTKMVSLKLQKRLAASVLKCGRGKVWLDPNEANEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKLARREERLAQGPGEKTSVAPPAPASQPAQVSKKSKK 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g3021 220 MobiDBLite consensus disorder prediction 160 195 - -
Alju03g3021 220 Gene3D - 68 201 - -
Alju03g3021 220 MobiDBLite consensus disorder prediction 206 220 - -
Alju03g3021 220 MobiDBLite consensus disorder prediction 68 96 - -
Alju03g3021 220 FunFam Ribosomal protein L19 12 67 - -
Alju03g3021 220 Hamap 50S ribosomal protein L19e [rpl19e]. 14 160 IPR000196 GO:0003735|GO:0005840|GO:0006412
Alju03g3021 220 MobiDBLite consensus disorder prediction 160 220 - -
Alju03g3021 220 PANTHER 60S RIBOSOMAL PROTEIN L19 12 199 IPR039547 GO:0003723|GO:0003735|GO:0022625
Alju03g3021 220 Gene3D - 13 67 IPR015972 GO:0003735|GO:0005840|GO:0006412
Alju03g3021 220 FunFam Ribosomal protein L19 68 203 - -
Alju03g3021 220 Coils Coil 172 192 - -
Alju03g3021 220 CDD Ribosomal_L19e_E 15 178 IPR033935 GO:0003735|GO:0022625
Alju03g3021 220 ProSitePatterns Ribosomal protein L19e signature. 18 37 IPR023638 -
Alju03g3021 220 MobiDBLite consensus disorder prediction 68 90 - -
Alju03g3021 220 Pfam Ribosomal protein L19e 15 156 IPR000196 GO:0003735|GO:0005840|GO:0006412
Alju03g3021 220 SUPERFAMILY Ribosomal protein L19 (L19e) 14 155 IPR035970 GO:0003735|GO:0005840|GO:0006412
Alju03g3021 220 SMART Ribosomal_L19e_2 14 157 IPR000196 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g3021 Alju-ChrAlju03 55231327 55233298 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g3021 12 220 Cytoplasmic Ribosomal Protein Gene Family AT3G16780 85.167 3.37e-129 361