Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g3013 ATGTCCACCATGCAGCCCCACAAGAGAAGAACACTCTCATTGGTCCTTGTAGGTTCTCTACTCTTGCTACTTGTGAAAGAAACAGAGCCACAAGAAACAACACACCTACATTTTCACAAACACCTTCAAGTAGCTCACTCCACCTGCCAAGGAACACTCTACCCTGACCTATGTGTCTCCACGCTGGCCTCCTTCCCGGATCTTACCTCTAAATCTGTTCCCCAAGTCATATGTTCCCTCGTCAACCACACCATGGACGAGGTCAGATCCTCGTCCTCCAACTGTACTGGTCTCAAAAGAAAGCTCCGAAATCTGAACCCGTTTCAACAAAGAGCTCTCGATGATTGCCTCCAACTGTTTGATAACACTCAGGAGGAGTTCAAAACCAGCATGGCCGATCTCTCCTATGCGAAGATCGATTCCAAGCGCTACCACGACTCACAGACTCTGCTGAGCGGCGCAATGACCAATGTTTACACTTGCCTCGACGGCTTTGCCGACGGCGACACCAATGGACACGTGAGACACATCATCCAGGACAACTTGTATCGGATTTGCCACCACGTTAGTAACTCATTGGCCATGCTCAACAAAGTGAAAAAGGGGGTGAAGAATCAGTCTCCGTCCGAGGCATTCAAAACGAGGCATGATGGCTTCCCATCTTGGCTTACCTCCAAAGACAGGAAGCTTCTTCAAGCTGCTGTTAATAAAACCAGGTTCGATCTGGTGGTGGCCAAAGATGGCTCCGGAAATTTCACCACCATCGGAGAAGCAGTAGCTGCCGCCCAAAACTCCACCACAACCAGGTTTGTGATACACATAAAGGCTGGGGCATACTTTGAGAATGTGGAAGTGATAAAGAAGAAGACGAATGTGATGTTCGTTGGAGATGGGATTGGGAAGACGATAATGAAGGCCAGTAGAAATGTGGTGGATGGGTGGACCACCTTTCAATCCGCTACTGTAGCGGTGGTAGGAGACGGATTCATGGCGAAGGGGATAACCATAGAGAACTCGGCGGGGCCCAGCAAGCACCAGGCGGTGGCCCTCAGGAACGGCGCCGACCTCTCGGCCTTCTACCAATGCAGCTTCGTCGGCTACCAGGATACCCTCTACGTCCATTCCCTCCGTCAGTTCTACCGGGAATGCGACATCTACGGCACCGTCGACTTCATCTTCGGCAATGCCGCCGCCGTTCTCCAGAACTGTAACCTGTACGCGCGGAAGCCCAATGACAACCAGATGAATCTGTTCACGGCCCAAGGCAGAGAGGACCCGAACCAGAACACAGGCATTTCCATCATAAACTCCAAGGTGGCGGCGGCGTCGGACTTGAACCCGGTGAAGTCAGCGTTCCCGACGTACCTGGGGAGGCCATGGAAATTGTACTCGAGGACGGTGTATCTGGGATGTTTCATGGAGGATTTGATAAATCCGGCAGGGTGGTTGGAATGGAACGGGTCGTTTGCACTGGATACTCTGTATTACGGGGAGTACAAGAACAGGGGTCCAGGTTCCAATACGAGCGGGAGGGTGACGTGGAAAGGTTACAGGGTGATCAATTCCTCCACAGAGGCTTCACAGTTCACTGTTGCCCAGTTCATTCAAGGCTCCGACTGGTTGAATTCCACCGGTGTTCCTTTCTTCCCTGGTCTCAGCCCCTGA 1665 0.5201 MSTMQPHKRRTLSLVLVGSLLLLLVKETEPQETTHLHFHKHLQVAHSTCQGTLYPDLCVSTLASFPDLTSKSVPQVICSLVNHTMDEVRSSSSNCTGLKRKLRNLNPFQQRALDDCLQLFDNTQEEFKTSMADLSYAKIDSKRYHDSQTLLSGAMTNVYTCLDGFADGDTNGHVRHIIQDNLYRICHHVSNSLAMLNKVKKGVKNQSPSEAFKTRHDGFPSWLTSKDRKLLQAAVNKTRFDLVVAKDGSGNFTTIGEAVAAAQNSTTTRFVIHIKAGAYFENVEVIKKKTNVMFVGDGIGKTIMKASRNVVDGWTTFQSATVAVVGDGFMAKGITIENSAGPSKHQAVALRNGADLSAFYQCSFVGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVLQNCNLYARKPNDNQMNLFTAQGREDPNQNTGISIINSKVAAASDLNPVKSAFPTYLGRPWKLYSRTVYLGCFMEDLINPAGWLEWNGSFALDTLYYGEYKNRGPGSNTSGRVTWKGYRVINSSTEASQFTVAQFIQGSDWLNSTGVPFFPGLSP 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g3013 554 CDD PMEI-like_3 47 198 - -
Alju03g3013 554 ProSitePatterns Pectinesterase signature 2. 385 394 IPR033131 -
Alju03g3013 554 PANTHER PECTINESTERASE 20 542 - -
Alju03g3013 554 Gene3D Invertase/pectin methylesterase inhibitor family protein 43 201 IPR035513 -
Alju03g3013 554 Pfam Plant invertase/pectin methylesterase inhibitor 46 195 IPR006501 GO:0004857
Alju03g3013 554 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 46 199 IPR035513 -
Alju03g3013 554 SUPERFAMILY Pectin lyase-like 239 551 IPR011050 -
Alju03g3013 554 Gene3D - 235 552 IPR012334 -
Alju03g3013 554 Pfam Pectinesterase 241 537 IPR000070 GO:0030599|GO:0042545
Alju03g3013 554 SMART PMEI_2 40 195 IPR006501 GO:0004857
Alju03g3013 554 NCBIfam pectinesterase inhibitor domain 12 181 IPR006501 GO:0004857
Alju03g3013 554 FunFam Pectinesterase 235 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g3013 Alju-ChrAlju03 55180648 55184457 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g3013 69 548 Carbohydrate Esterase AT4G02320 52.236 0.0 530