Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g3012 ATGGCTTTCAAGCTCAAGTCTCTTGTTAGTTTTACACGCTCCCTCTTCCTTCTGCTTTCCTTATTCGCAGTGCCATCTCTAGCAGATAACCCAGTGGCCACCATCTTAACCCCTCCAGACGCAGTTTGTGAAACAACCAGGTACCCTCCCCTGTGCAAAACCCTGCTTGGTAATCAAAACGGCAACGTCTTTGACTTTGGCCGCATATTGCTTCGTAAGTCCTTATCCCAGTCTCGCCGATTCTTGAACCACCTGGATTCCTATCTACAATCTTCGTCCTCTCTGTCACAGCCCACCATTCGAGCTCTCGAGGACTGTCGCTTCCTCGCTGGCCTCAACTTCGAGTACCTATCCGACGCCTTGGACGCTGTGCAGAATCTCAATGATTTCCTGTCTCCCTCTCAAGCCCAAGACCTTCAAACCGTATTCAGCGCCGTCCTGACCAATCAGCAAACATGTCAGGATGGCCTACAAACCACTGCTTCGGATGGAAGAGCAAAGGGCGATATTTCTTCCGTACTCTCCGACGACACGAAGCTTCACAGCGTGTCTCTTGCTCTCTTCACCAAAGGTTGGGTGCCCAAGAAGAATATCATAACCTCATGGCCAAACAATGGGGTACATTTGGATTTCAGCCATGGTCGTTTGCCTTTGAAAATGTCGCCCCGAGTAGAGTCCATTTTCAACTCCGCAAAAAGCCACGGCAGGAGACTGCTCCAGTCCGACCAAAGTGTGGTGATCACCGACATCGTGGTTGTCAGTCAGGATGGAAGCGGAAACTTCACCAGCATCAACGACGCCATCAGAGCCGCACCTAACAACACTGCTTCCGGTGCCGGTTACTTCTTAGTATACATCACCGAGGGTGTGTACCAGGAATACGTATCCATACCCAAAAACAAACCGTACTTGATGTTATTGGGAGACGGCATCAACAACACCATCATCACCGGCAACCACAACGTCGTCGACAATTATACAACATTCAACTCAGCGACATTTGCCGTGGTGGCACAAGGATTCGTGGGGGTGAGCATTACATTCCGTAACACGGCGGGGCCCAGCAAGCACCAAGCCGTTGCCGTCAGGAACGGAGCGGACCTGTCCGCGTTCTACAGCTGCAGCTTCGAAGGGTACCAAGACACTCTTTACGCACATTCTCTGAGACAATTCTACAGAGAATGTGACGTATACGGAACCGTGGACTTCATATTCGGGAACGCAGCCGTGGTTCTCCAAAACTGCAACCTGTATCCCCGGCTTCCGTTGAGCGGTCAGTTCAACGCGATCACGGCGCAGGGTCGAACGGACCCCAATCAGAACACAGGCACGTCCATTCAGAACGCGACCATAAAGGCGGCCGACGATTTGGCTCCGTTGGTAGGGACGGTGAAGACGTACCTGGGGAGGCCGTGGAAGGAGTACTCGAGGACGGTGTTTATGGAGTCATGGATGGACAGTCTCATAGATCCTGCTGGTTGGCAGGTGTGGGACGGCACCTTTGCTTTGAGCACGTTGTACTACGCAGAGTATAACAACAGTGGGCCCGGTGCTGACACGAGCAACAGGGTGACGTGGCTTGGTTACCACGTCATCAATGCCACGGGTGCGGCTAATTTGACTGTGTCCAACTTCTTGATGGGGGATGCTTGGTTGCCTCAAACTGGGGTCCCATACTCTCCCGGACTTTGA 1692 0.5242 MAFKLKSLVSFTRSLFLLLSLFAVPSLADNPVATILTPPDAVCETTRYPPLCKTLLGNQNGNVFDFGRILLRKSLSQSRRFLNHLDSYLQSSSSLSQPTIRALEDCRFLAGLNFEYLSDALDAVQNLNDFLSPSQAQDLQTVFSAVLTNQQTCQDGLQTTASDGRAKGDISSVLSDDTKLHSVSLALFTKGWVPKKNIITSWPNNGVHLDFSHGRLPLKMSPRVESIFNSAKSHGRRLLQSDQSVVITDIVVVSQDGSGNFTSINDAIRAAPNNTASGAGYFLVYITEGVYQEYVSIPKNKPYLMLLGDGINNTIITGNHNVVDNYTTFNSATFAVVAQGFVGVSITFRNTAGPSKHQAVAVRNGADLSAFYSCSFEGYQDTLYAHSLRQFYRECDVYGTVDFIFGNAAVVLQNCNLYPRLPLSGQFNAITAQGRTDPNQNTGTSIQNATIKAADDLAPLVGTVKTYLGRPWKEYSRTVFMESWMDSLIDPAGWQVWDGTFALSTLYYAEYNNSGPGADTSNRVTWLGYHVINATGAANLTVSNFLMGDAWLPQTGVPYSPGL 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g3012 563 CDD PMEI-like_3 41 192 - -
Alju03g3012 563 ProSitePatterns Pectinesterase signature 2. 397 406 IPR033131 -
Alju03g3012 563 Gene3D Invertase/pectin methylesterase inhibitor family protein 40 190 IPR035513 -
Alju03g3012 563 FunFam Pectinesterase 244 563 - -
Alju03g3012 563 Gene3D - 245 563 IPR012334 -
Alju03g3012 563 Pfam Pectinesterase 251 549 IPR000070 GO:0030599|GO:0042545
Alju03g3012 563 Pfam Plant invertase/pectin methylesterase inhibitor 41 187 IPR006501 GO:0004857
Alju03g3012 563 FunFam Pectinesterase 40 190 - -
Alju03g3012 563 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 41 190 IPR035513 -
Alju03g3012 563 SMART PMEI_2 34 187 IPR006501 GO:0004857
Alju03g3012 563 SUPERFAMILY Pectin lyase-like 247 562 IPR011050 -
Alju03g3012 563 PANTHER PECTINESTERASE 24 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g3012 Alju-ChrAlju03 55166952 55168727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g3012 15 563 Carbohydrate Esterase AT1G02810 57.019 0.0 644