Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g3009 ATGGCTTTCAAGCCTGTTAGTTTTACACGCTCCCTTTTCCTTCTGCTTTCATTCTTCGCACTGTCATCTCTATCAGATAACCCTGCGGCCTCCCACATAATCCCTCCAGACACACTCTGTGACTCCACCAGGTACCCGGCCCTTTGCAAAACTGTGCTCGGTAGTCAAAACGGCACCGTTTTTTACTTTGGCCGCATATTGCTTCGAAAGTCCTTATCCCAGTCTCGGATATTCTTGAACCAGGTGGATTCCTATCTGCAATCTCCGTCCTCTCTGTCTCAGCCCACCATTGGAGCTCTCAAGGATTGTAGCTTCCTCGCTGGCCTAAACTTCGAGTTCTTATCAGACGCCCTGAACGCTGTGCAAAATCTCAATGATTTCCTGTCTTCCTCTCAAGCCCAAGACCTTGAAACCGTGTTCAGTGCCGTCCTCACCAACCAGCAAACATGTGAAGATGGCTTAGAAACCACAGCTTTCGATGGAAGAGTAAAGGACGATCTTTCTTCCTCGCTCTCTAACGACTCCAAGCTTCACAGCGTGTCTCTTGCTCTCTTCACCAAAGGTTGGGTGCCCCAGAAGAATACCATAACCTCATGGCCAAACAATCGGATACTTTTGGATTTCAGCAATGGTCGTTTGCCATTGGGTATGTCGCCCCGAGTAGATTCCATTTTCGACTCCGCAAGAAGCCATGGCAGAAAACTGCTGCAGTCCGTCAACGGAAGTGTGGTGGTCACCGGCTCCGTGGTTGTCAGCCAGGATGAAAGCCGAAACTTCACCACCATCAACGACGCCATCAACGCTGCCCCTAACAACACTGCTTCCGGTGTCGGTTACTTCTTGATATTCATAACCGCTGGCGTGTACCAAGAATACGTATCCATACCCAAATACAAACAGTACTTGATGTTAGTGGGAGATGGCATCAACCGCACCATCATCACCGGTGACCACAACGTCGTCGATGGTTATACAACATTCAACTCCGCGACATTTGCCGTGGTAGCACAAGGGTTTGTGGCGGTGAACATTACATTCCGTAACACGGCGGGGCCGAGCAAGCACCAAGCCGTTGCCATGAGAAGCGGAGCAGACTTGTCCGTATTCTACCGATGTAGCTTTGAAGGTTACCAAGACACTCTGTACACACATTCTATGAGGCAATTCTACAGAGAATGTGACGTATACGGAACCGTGGACTTCATATTCGGGAACGCAGCCGTGGTTATGCAAAACTGCAATCTGTATCCCCGGCTTCCGTTGAGCGGTCAGTTCAACACCATCACGGCGCAGGGTCGAACGGACCCCGGTCAGAACACGGGCACGTCCATTCAGAACGCGACCATAAAAGCGGCCGACGATTTGGCTCCTTCGGTAGGGACGGTGCAGACGTACCTGGGGAGGCCGTGGAAGGAGTACTCGAGAACTGTGTTCATGGAGTCGTGGATGGACAGTCTCATCGATCCTGCTGGTTGGCACGACTGGAACGGCACCTTTGCCTTGAGCACGTTGTACTACGCAGAGTATAACAACAGTGGACCCGGTTCTGACACGAGCAACAGGGTGATGTGGCCAGGTTACCACGTCATCAATGCCACGGATGCGGTTAATTTCACGGCGGCTAACTTCTTGATCGGGGATGCTTGGCTGCCTCCAACTGGGGTTCCTTACTATTCCGGATTTGCCTCCTAG 1692 0.5142 MAFKPVSFTRSLFLLLSFFALSSLSDNPAASHIIPPDTLCDSTRYPALCKTVLGSQNGTVFYFGRILLRKSLSQSRIFLNQVDSYLQSPSSLSQPTIGALKDCSFLAGLNFEFLSDALNAVQNLNDFLSSSQAQDLETVFSAVLTNQQTCEDGLETTAFDGRVKDDLSSSLSNDSKLHSVSLALFTKGWVPQKNTITSWPNNRILLDFSNGRLPLGMSPRVDSIFDSARSHGRKLLQSVNGSVVVTGSVVVSQDESRNFTTINDAINAAPNNTASGVGYFLIFITAGVYQEYVSIPKYKQYLMLVGDGINRTIITGDHNVVDGYTTFNSATFAVVAQGFVAVNITFRNTAGPSKHQAVAMRSGADLSVFYRCSFEGYQDTLYTHSMRQFYRECDVYGTVDFIFGNAAVVMQNCNLYPRLPLSGQFNTITAQGRTDPGQNTGTSIQNATIKAADDLAPSVGTVQTYLGRPWKEYSRTVFMESWMDSLIDPAGWHDWNGTFALSTLYYAEYNNSGPGSDTSNRVMWPGYHVINATDAVNFTAANFLIGDAWLPPTGVPYYSGFAS 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g3009 563 SUPERFAMILY Pectin lyase-like 245 560 IPR011050 -
Alju03g3009 563 SMART PMEI_2 31 184 IPR006501 GO:0004857
Alju03g3009 563 FunFam Pectinesterase 242 561 - -
Alju03g3009 563 NCBIfam pectinesterase inhibitor domain 12 186 IPR006501 GO:0004857
Alju03g3009 563 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 37 187 IPR035513 -
Alju03g3009 563 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 187 IPR035513 -
Alju03g3009 563 CDD PMEI-like_3 38 189 - -
Alju03g3009 563 Pfam Pectinesterase 249 547 IPR000070 GO:0030599|GO:0042545
Alju03g3009 563 Gene3D - 243 561 IPR012334 -
Alju03g3009 563 ProSitePatterns Pectinesterase signature 2. 395 404 IPR033131 -
Alju03g3009 563 Pfam Plant invertase/pectin methylesterase inhibitor 38 184 IPR006501 GO:0004857
Alju03g3009 563 PANTHER PECTINESTERASE 36 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g3009 Alju-ChrAlju03 55150447 55152239 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g3009 12 563 Carbohydrate Esterase AT4G02330 56.294 0.0 632